Gene Huta_1292 details

Gene Information

• Locus tag: Huta_1292
• ID: 8383568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 1265883
• End bp: 1266563
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644972352
• Product: SNARE associated Golgi protein
• Protein accession: YP_003130201
• Protein GI: 257052368
• COG category: [S] Function unknown
• COG ID: [COG0398] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCGG CAGTGAGACG CCAACTCGGC GCGATCGCGC TCGTCGCTCT CGCCACTGCC 
GGCGTCGCGG TGTTCGGCTC GCTCGACGCC CTGCGCTCGG TCGTCGAGAC GGCTGTCGGG 
TCGCCACTCG CATTCGCTGC CGTGCTGCTT GCCGTTTACG CTGTCCGGCC GCTGGTGCTG 
TGGCCTGTCT CGCTGGTGTC GATCCTCGTC GGGTATGGTC TCGGCATCCC GCTTGGCGTC 
CCTGTTGGCC TTCTCGGGGC CGTCTGTACC TCGCTGCCGG CGTATCTGCT CGCCCGTCAC 
GCCCCGCGTG AGCGCGGTCT CTTCGGCCGA CTCCACGACC GCGGTAGCCA CGTCGTCGAG 
ACCACCGGCG CGTTCCGCGG CGTGGCGGCT GCACGACTTC TCCCCCTGCC AGCGGACGTG 
ATCTCGTATG GGGCCGGCCT CTCCTCGGTC CCGACGCGAG CGTTCGTCGC CGGGACGCTC 
GTGGGTCAGC TTCCATGGGT GCTCGCGGGT GTCGTCGCCG GCAGTTCGAT GCGGACGCTC 
GCCGTCGAGG GGAGCGCCGG CGGCCTTCCC CTGGTCGTCG GGGCTGCTGC GGTCGGTGTG 
CTCGTTCTTG CCAGTCCCGT GATCCGTCAC ATCGTCGACT ACGACCGACT GCCCTCCATG 
GGATCGTCCG GCTCGCAGTG A 

 

Protein sequence

MEPAVRRQLG AIALVALATA GVAVFGSLDA LRSVVETAVG SPLAFAAVLL AVYAVRPLVL 
WPVSLVSILV GYGLGIPLGV PVGLLGAVCT SLPAYLLARH APRERGLFGR LHDRGSHVVE 
TTGAFRGVAA ARLLPLPADV ISYGAGLSSV PTRAFVAGTL VGQLPWVLAG VVAGSSMRTL 
AVEGSAGGLP LVVGAAAVGV LVLASPVIRH IVDYDRLPSM GSSGSQ