| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1290 |
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| Symbol | |
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| ID | 8383566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1262517 |
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| End bp | 1265636 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644972350 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_003130199 |
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| Protein GI | 257052366 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACG CCGAACTCGC CGTCGACGAG GTCACGCTGC CGATCAAGCG TATCGAGGGC
GACACCCTCG CCGACCGGCT GACCGACAAC GCCTACCACA ACATTCTGCC GGCACGGTAC
CTTCGGAAAG ACGCCGACGG CGAACTCGTC GAGCAACAGG AGGATCTCTT CGAACGCGTC
GGGAAGAACA TCGCGCTGGC CGAAGCCGTC TACGAAGCGC GAAATCAGGA CGTCGAGATC
ACCGTCACGC CCGACCAGCT CAAACCCGAC CATCCCCGTC GGGACGAGCT CGCCGAGGAA
GTCTTCGGGA AAGGGACATC CATTGGCGAC GACGCCGAGA CGACCCTCTC GGTCTATAAC
GTCAACAAGT TCGCCTACGA GACTGTCGTC CCCGAACTCC CCGCGGACGT CCGCGAGCAC
GTCGAGGAGA CCGCCACGGA GTTCCAGGAC CTGATGGAGA ATCTCTCCTT TATGCCGAAC
TCGCCGACGC TGATGAACGC CGGCGACGAA CTTCAGCAGC TCTCTGCGTG TTTCGTCGAC
AGTCCCGAGG ACGACATCGA TGACATTCAT CAAACAGCGA AAGAAGCCGC ACAGGTTTTC
CAGAGCGGCG GCGGAATGGG GTACGCCTTC TGGCGATTAC GGCCCTATGG AGATGCTGTC
GGATCGACGG GAGGAATCGC TTCCGGTCCG ATAACGTTCA TGCGGACGTT CGATCAGATG
TGCGAGACGA TCGCCCAGGG CGGTGCCCGG CGGGGTGCCC AGATGGGCGT CATGCGGGTC
TCCCATCCGG ACGTCATCCA GTTCATCCAC GCCAAGAACA AGGACGTCTC CCTGGCGCGG
ACCTTGCGGC TGAACGATCC CGACGATTTC ACCCACACGT CCTTCTCGGA CGCCTTGGAG
GAAGCCCGCG AATTGATCGA CGACGACGGG CGGGTTCCCG AACACCTCCG CAACGCCGTC
GAGGGCCACC TCTCGAACTT CAACATCTCG GTGGGCATCA CCGACGAGTT CATGGACGCC
CTCCAGAACG ACGAGGAGTT CACGTTCACC AATCCCCGGA CGGGCGATCC CCACATCGTC
ACCGCCGAAA CCAAGGAACT GTACGACATG TTCGGCCTCG GCGAGTACGT CGAGGTCGGC
GAGGAACTGT CGATTCCAGC CAGCGAGCTC TGGGACGACA TCGTCGAGGG CGCTCACGAG
AACGGCGAAC CCGGCGTGAT CTATCTCGAA CGCGCCAACA AGGAACATTC CTTCGACGTG
GAAGAAAATT CAGACCATAG AATCCTTGCA ACAAACCCGT GTGGTGAACA ACCCTTGGAG
GAGTACGAGG CCTGCAACCT CGGCCACATC AACCTCTCGA CGCTGGCCGC CGAGGGGGCC
CCGGACTGGC GGGTCTGGTC CGAACGCCAC GCCGACGACT ATGACGACTT CGAGGCGGCG
GTCGAGGCGT ATCTCGACGA AGCCATCGAC GTCGAGGAAC TCGAATACCG CATCGAGATG
GCGACCCGGT TCCTCGAGAA CGTCGTCACG ATGTCGGACT TCCCGGTCGA GAAGATCGAG
GAGAAAGTCC GGGACATGCG CAAGATCGGG CTGGGGATCA TGGGACTGGC CCAACTGTTC
ATCCAGCTCG GCGTCAAGTA CGGCAGCGAC GAGGGCGACG CGATCGCCGG CCACCTCATG
CAGAAGATCA ACCACGACTC CAAGTGGGCG AGCCACGAAC TCGCCGAGGA GCGGGGCGTC
TTCAACGACT GGGAGGACTC CAAATACGCC GACCCGACCG AGTACCGCGA GTGGTTCGAA
CACTACGTCG GCGAGGACGC CGACGACTGG GCCGAGGGCT TCCCGATCCG CAACCACAAC
ACGACGACCA TCGCTCCGAC CGGCACGACC AGCATGGTCG GGAACACGAC GGGTGGCTGT
GAGCCCGTCT ACAACGTCGC CTACTACAAG AACGTCTCCG ACGACGTCCA GGGCGACGAG
ATGCTCGTGG AGTTCGACGA CTACTTCCTC CGCGTGCTGG AGGAGAACGG CATCGACGTC
GAGACCGTCA AGGAGGAGGC CCAGGAACAG ATGGCGACAA ACGAGTTCGA CGGCGTCGAG
GGGCTCTCGA CGGTGCCCGA CGCCATCGGC GAACTGTTCG TCACGACGGG CGACCTCTCG
CCCAAGCAGC ACGCCTCGAT CCAGTGTACG CTCCAGGACG GCGTGGACAG CGCCATCTCG
AAGACGGTCA ACGCGCCCAA CGACTCCACG ATCGAGGACG CCAAAGATGT CTTCGAGTAC
ATCTACGAAC ACGGCGGCAA AGGCGTCACC TATTACCGGG ACGGCACCCG GAGCAAGCAG
GTGCTGACCA CCAGGGCGGA GAACACCGAC TTCGCCGACA TGGACACCGA GGAGGTCATC
GCCCAGATCG AGGCCGTCTT CGGCGGGATC GAGGCCTTCC TCGATGACGA GGACGTCAGG
GCAGCCCTCG ACGGTGAAAT CGAAACGCTC CTCGGCGAAG CCGACGGCGA ATACGCCGAC
TACGCCAAAA AGCGCCCGCG GCCTGACGTC CTCCATGGCG TGACCCAGCG TATCGACACC
GGCTACGGGA AGGTCTACGT CAACATCAAC GAGGATCCCG AAGCCGAACG GCCCTTCGAG
CTGTTCGCCA ACATCGGCAA CTCCGGCGGC TTCACGGCGT CGTTCACCGA GGCCCTCGCC
AAGACCGTCT CGGCCGCACT CCGGGCCGGC GTCGATCCCA ACGAGATCGC CGGCGAACTC
CAGGGTATCC GCTCACCGAA GGTCGCCTGG GACAAGGGCG AACAGATCCA GTCGATCCCG
GACGCCATCG GCACGGCGAT GCGCCGATAC CTCGATGGCG ACATCGAGCG GGCCTATCCA
CAACAGCAGA CGCTCGAAGA GACCGCCGAC GAAGAGGATC CGGAAGCCAT GGGCCACTCG
ACTGACGGCG GCGCGACGAC TGCGCCGAGT GAATCGGTTG AGCCGACCGA GCCGAGTGGT
GACCAGCAGG AACTCATCGA GAACGGCGAG AGTCCCGAAT GTCCCGAGTG TGGGTCGATG
TCGCTGTATT ACTCCGAAGG CTGCAAGACC TGTGAGTCCT GTGGCTGGTC GGAGTGTTGA
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| Protein sequence | MSDAELAVDE VTLPIKRIEG DTLADRLTDN AYHNILPARY LRKDADGELV EQQEDLFERV
GKNIALAEAV YEARNQDVEI TVTPDQLKPD HPRRDELAEE VFGKGTSIGD DAETTLSVYN
VNKFAYETVV PELPADVREH VEETATEFQD LMENLSFMPN SPTLMNAGDE LQQLSACFVD
SPEDDIDDIH QTAKEAAQVF QSGGGMGYAF WRLRPYGDAV GSTGGIASGP ITFMRTFDQM
CETIAQGGAR RGAQMGVMRV SHPDVIQFIH AKNKDVSLAR TLRLNDPDDF THTSFSDALE
EARELIDDDG RVPEHLRNAV EGHLSNFNIS VGITDEFMDA LQNDEEFTFT NPRTGDPHIV
TAETKELYDM FGLGEYVEVG EELSIPASEL WDDIVEGAHE NGEPGVIYLE RANKEHSFDV
EENSDHRILA TNPCGEQPLE EYEACNLGHI NLSTLAAEGA PDWRVWSERH ADDYDDFEAA
VEAYLDEAID VEELEYRIEM ATRFLENVVT MSDFPVEKIE EKVRDMRKIG LGIMGLAQLF
IQLGVKYGSD EGDAIAGHLM QKINHDSKWA SHELAEERGV FNDWEDSKYA DPTEYREWFE
HYVGEDADDW AEGFPIRNHN TTTIAPTGTT SMVGNTTGGC EPVYNVAYYK NVSDDVQGDE
MLVEFDDYFL RVLEENGIDV ETVKEEAQEQ MATNEFDGVE GLSTVPDAIG ELFVTTGDLS
PKQHASIQCT LQDGVDSAIS KTVNAPNDST IEDAKDVFEY IYEHGGKGVT YYRDGTRSKQ
VLTTRAENTD FADMDTEEVI AQIEAVFGGI EAFLDDEDVR AALDGEIETL LGEADGEYAD
YAKKRPRPDV LHGVTQRIDT GYGKVYVNIN EDPEAERPFE LFANIGNSGG FTASFTEALA
KTVSAALRAG VDPNEIAGEL QGIRSPKVAW DKGEQIQSIP DAIGTAMRRY LDGDIERAYP
QQQTLEETAD EEDPEAMGHS TDGGATTAPS ESVEPTEPSG DQQELIENGE SPECPECGSM
SLYYSEGCKT CESCGWSEC
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