| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1262 |
|---|
| Symbol | |
|---|
| ID | 8383537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1235183 |
|---|
| End bp | 1237117 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644972321 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003130171 |
|---|
| Protein GI | 257052338 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG ACCTCGACGA CGACGAAGTA TTCGAGGACG TCCGCGACCG CGCGGATCGC
CCGATGCGCC GGCTGTTTTC CGAATACGGG GGACGATATT CGTTCCCGTT CGTGATCGGG
TTCGTCAGTA GCGTCGCCGC CCGGATCCTC GACCTGCTTC CGCCCCTCCT GCTTACGCTC
GCCATCGACG CCATCTTCGA CGACCAGCAG TACAGCCTCT GGTTGGTCCC CCAGTCGCTG
ATTCCCAAAA CCCAGAGCGC ACAGCTCTGG CTCACCGTCG GTATCATCGC CGCCGCGTTC
CTGATCGGGG CCGGCTTCCA CTGGACGCGC AACTGGGGGT GGAACACCTT CGCTCAGAAC
ATCCAGCACA ACGTCCGGAC GGACACCTAC GACAAGATGC AGCGCCTCAA CATGGACTTC
TTCGCCGACA AGCAGACCGG CGAACTCATG TCGATCCTCT CGAACGACGT CAACCGGCTC
GAACGCTTCC TCAACGAGGG GATGAACGCG TTCTTCCGGC TGTCGATCAT GGTGCTCGGG
ATCTCCGTGA TCCTCTTCTA CTGGAACTGG CAGCTCGCGC TGGTGACACT CGGCGTCGTC
CCCCTGATCG GCTTTTTCAC CTACAAGTTC GTCGAAACTA TCCAGCCCAA GTACGCCGAC
GTCCGTTCGT CCGTGGGCCA GCTCAACTCA CGCCTGGAGA ACAACCTCGG GGGCATCCAG
GTCATCAAGG CCGCCAACAC CGAGACCTTC GAATCCGATC GGGTGGATGA TGTCTCCGAA
GACTACTTCG ACGCCAACTG GGACGCCATC GGCACCCGGA TCAAGTTCTT CCCCGGCCTC
CGGCTGCTGT CGGGCGTCGG GTTCGTCGTC ACCTTCCTCG TCGGCGGCCT GTGGGTGTTC
ACCTCCCAGA CCACCGGAAC CGGGCCGTGG TTCTTCACGG GCAAGCTCTC GGTGGGGGAG
TTCGTCGGCT TCATCCTGCT GTCCCAGCGG TTCATCTGGC CGATGGCGCA GTTCGGGCAG
ATCATCAACA TGTACCAGCG CGCCCACGCC TCCAGTGAGC GTATCTTCGG GCTGATGGAC
ACGCCCAGCC GGATCGTCGA AGACCCCGAC GCCGAACCCC TCGCGGTAAC CGACGGCCAC
GTCGAATTCG ACGATGTCAC CTTCGGCTAC GACGACGAGG AGACCATCGT CGAGGACATC
GCCTTCGAGG TCGAGGGCGG CGATACCGTC GCCTTAGTCG GTCCGACCGG CGCGGGCAAG
TCCACCGTGA TGAAGCTCCT CCTCCGGATG TACGACGTCG ACGAGGGAGC CATCGAGATC
GACGGGACGG ACCTCCGGGA CGCCACTATT CCGAGCCTCC GGCAGGCGCT CGGGTACGTC
AGCCAGGAGA CGTTCCTGTT CTACGGCACG GTCCGGGAGA ACATCGAGTA CGGCACGTTC
GACGCCGAGA AGGAGGCAGT CGTCGAGGCG GCCAAGATGG CCGAAGCCCA CCGCTTCATC
CAGAACCTGC CCGACGGCTA CGACACGAAA GTCGGCGAGC GCGGCGTGAA GCTCTCGGGT
GGCCAGCGCC AGCGGATCGC CCTCGCGCGA GCGATTCTCA AGGATCCCGA GATCCTCGTT
CTGGACGAGG CGACCTCCGA CGTCGACACC GAGACGGAGA TGTTGATCCA GCGCTCGCTG
GATAAACTCA CCGCCGACCG GACGACCTTC GCCATCGCCC ACCGGCTCTC GACGATCAAG
GACGCCGAGA AGATCGTCGT GATCGAGGAC GGCCGGATCG TCGAACGCGG CACCCACGAG
GACTTACTCG CCGATGACGG CCTCTACGCC AAGCTCTGGG CCGTCCAGGC CGGCGAGATC
GACGAACTGC CCCAGGAGTT CATCGAGCGG GCTGCCGAAC GCCGTGCCCA GACGGAATCG
GAAGCCGACG ACTGA
|
|---|
| Protein sequence | MSIDLDDDEV FEDVRDRADR PMRRLFSEYG GRYSFPFVIG FVSSVAARIL DLLPPLLLTL
AIDAIFDDQQ YSLWLVPQSL IPKTQSAQLW LTVGIIAAAF LIGAGFHWTR NWGWNTFAQN
IQHNVRTDTY DKMQRLNMDF FADKQTGELM SILSNDVNRL ERFLNEGMNA FFRLSIMVLG
ISVILFYWNW QLALVTLGVV PLIGFFTYKF VETIQPKYAD VRSSVGQLNS RLENNLGGIQ
VIKAANTETF ESDRVDDVSE DYFDANWDAI GTRIKFFPGL RLLSGVGFVV TFLVGGLWVF
TSQTTGTGPW FFTGKLSVGE FVGFILLSQR FIWPMAQFGQ IINMYQRAHA SSERIFGLMD
TPSRIVEDPD AEPLAVTDGH VEFDDVTFGY DDEETIVEDI AFEVEGGDTV ALVGPTGAGK
STVMKLLLRM YDVDEGAIEI DGTDLRDATI PSLRQALGYV SQETFLFYGT VRENIEYGTF
DAEKEAVVEA AKMAEAHRFI QNLPDGYDTK VGERGVKLSG GQRQRIALAR AILKDPEILV
LDEATSDVDT ETEMLIQRSL DKLTADRTTF AIAHRLSTIK DAEKIVVIED GRIVERGTHE
DLLADDGLYA KLWAVQAGEI DELPQEFIER AAERRAQTES EADD
|
|---|
| |