Gene Huta_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1186 
Symbol 
ID8383461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1159788 
End bp1160684 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID644972245 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003130095 
Protein GI257052262 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.141917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCAG AATCGGACAG TCAACTGGAC ACGGCTGTCG AGGATGGCGG TGGGTCGGTC 
TCGACGGCGG CGATCGGGAA CGCTATCGAC GAACTGCTTC GGACGTCCGA GAACGTCTCG
CGGAGTTCCC AGCAGATCAG CGAACTCGCG AACGAACAAT CCGAGAACAT GCAGGAGGTC
GCGGGCGAGG TGTCGAACCT CTCGGCGACG GTCGAGGAGG TCGCTTCGAG TGCCAACGAG
GTCAAGGCCG TCAGCCAGCA GGCGAGCCAG CTCGCCGATC AGGGTCGAGA CGTGGCCGAC
GACGCCATCG ACGCCATGGA GGGCGTCGAC GAGGCCAACG AGGAGGTCTC GGAGGATGTC
CAGCAGTTGC GCGATCGCAT CGACGAGATC GACGAGATCG TCGAGGTCAT CAACGACATC
GCCGATCAGA CCAATATGCT GGCGCTGAAC GCCTCGATCG AGGCCGCTCG AGCGGGCGAG
GCGGGCGAGG GCTTCGCGGT GGTCGCCGAC GAGGTCAAGA GCTTAGCCGA GGAGTCCCAG
CAGAACGCCA CCGAGATCGA GGAGATGGTC GCCGACATCA AGGCCGAGAC CGAGTCGACC
GTCGACAGCA TCGGCGATGC CAACGAGCAG GTCGAAGACG GGATCGAACA GGTCGACGAG
ACAGTCGACA TCCTCAAGAA GATCGATCAG GCCGTCACCG AGGCCGCCGA AGGGGCTCAG
GAAGTCGCCG AGGCGACCGA CGACCAGGCC GCCAGCACCG AGGAGGTCGC TTCGATGGTC
GATCGGACCG CCGAGACAGC CGAGGAAGTC GCCGACGAGA TCGAGGATAT CGCGGCCGCC
AACGAACAGC AGGCGGCGAA GGTCAACGAA CTCGAGTCGC TGCTGGACCG CAACTGA
 
Protein sequence
MASESDSQLD TAVEDGGGSV STAAIGNAID ELLRTSENVS RSSQQISELA NEQSENMQEV 
AGEVSNLSAT VEEVASSANE VKAVSQQASQ LADQGRDVAD DAIDAMEGVD EANEEVSEDV
QQLRDRIDEI DEIVEVINDI ADQTNMLALN ASIEAARAGE AGEGFAVVAD EVKSLAEESQ
QNATEIEEMV ADIKAETEST VDSIGDANEQ VEDGIEQVDE TVDILKKIDQ AVTEAAEGAQ
EVAEATDDQA ASTEEVASMV DRTAETAEEV ADEIEDIAAA NEQQAAKVNE LESLLDRN