Gene Huta_1167 details

Gene Information

• Locus tag: Huta_1167
• ID: 8383442
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1143503
• End bp: 1144060
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644972226
• Product: transcription regulator
• Protein accession: YP_003130076
• Protein GI: 257052243
• COG category: [K] Transcription
• COG ID: [COG1510] Predicted transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.25103
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGAAG ACAGCGATAC CGACCAACCG ACAGCCGAGG GACCACCGCC AGACGCAGTC 
GTGGAAGCCA GAGAGACGAT GATCGGGGCC TTCGAACGCT CGGCGGAGAT CTACGGCGTC 
AAACGAAGCT ACGGGCGACT CTACGGGGTC CTGTACTTCG CCGAGGAGCC CCTCTCGCTT 
GACACACTCG CCGCGCGAAG CGAGTACGCC AAGTCGACGG TCTCGACGGC GATGAGCGAC 
CTCCAGCGCT ACCACATGGT GACCCGTCGC TCGCTCCCGG GAGAGGGCAA AAAAGCGTTC 
TACGAGGCCG AAACCGACTT CTGGCAGATA TTCCGGGCGT TCCTGAACAA CGAAGTCCGC 
CGGGAGATCG AGACGATGAC GGGCGCGCTC GAAGCCGCTA TCGACTCGCT CGAAGATGTC 
GAGGACGAAC GCGCCGAGCG CGACCGCCGG AAGCTTCGTG AGCTGAAACA GGTCTACGAG 
CGGAGCGATC GGATCGTCGG CCTGTTCAAC AGCCAGTCCA TGGACCGGAT CGTCTCGGCG 
CTGGAACGGC TCCAGTGA 

 

Protein sequence

MMEDSDTDQP TAEGPPPDAV VEARETMIGA FERSAEIYGV KRSYGRLYGV LYFAEEPLSL 
DTLAARSEYA KSTVSTAMSD LQRYHMVTRR SLPGEGKKAF YEAETDFWQI FRAFLNNEVR 
REIETMTGAL EAAIDSLEDV EDERAERDRR KLRELKQVYE RSDRIVGLFN SQSMDRIVSA 
LERLQ