| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1093 |
|---|
| Symbol | |
|---|
| ID | 8383367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1067241 |
|---|
| End bp | 1068965 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644972154 |
|---|
| Product | putative sodium/phosphate symporter |
|---|
| Protein accession | YP_003130005 |
|---|
| Protein GI | 257052172 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.125975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCC CCGATCGTGG TCACTCGACC GGAGCCAGTT GTCTGTGGGC ACCAGTCCGG
CTGTCGAGGG CGCAGTATCT CCTCGGCCTC CTGGCCGCGT TCAGCGTCGC GGTCGCGCTC
CGGATGGGGC CGCTGTTCTG GTCCCCGCTG CCGTTCAACC CCGACGGGAT CGTCTACGCC
GGCCTCGTCA GGGAGACCAT CGCCACCGGC CACTTACCAT TGGACGGGCT CCCGGCTGAC
AGTTTTCATT TCACCACGAT GCTTGCCATC TGGGAAACGG TCGTCGGTCA TCCGAGTCGG
TTCCTCTCCC AGCCGGTGAT CGCCATCGTC GGCGCACTTC CGTCGCTCGT GGCCGCCGTC
TTTGCTCATC GACTGACCGG ACGACTGGGC TGGTCACTCT CGGGACGCCG GCTCGCTGGA
TCGCTTGCCA GCCTCCTGCT CGCGGTCGAT GGCGTCTACC TTCACCGGTC GATGCCCGTC
GACGAACAGA CTGTCGGGCT CCTCGTCGTC CCGCTGGCTG CACTCGTCCT GGCTCGGTCG
ATGCCGGACG GCAGACGTCG CTGGTACGTC GTGCTCGGGG CACTCCTCGT GAGTTTGCCG
CCGTTGCATA ACCTCGACAG CATGGTCGCG CTGTTCGCCC TCGTCCTGGT CGTCTGTGTC
CGTCGCGTCA GCGTCCGAAC CCTCCTGGTC GGGGGTCTCG TCGCACTCGG GTTCCTGGGC
TATTTCGTGG GCTACTCCTG GGGCATTGCC GCACTCACGC CGGCAACCGT CATCCAGTCA
CAGCGGATCA GTTACGCGCC GGGACTGTTG GCCGCCTGGC TCATCCTCGT CGGTCTGCTG
CTGGCCCGAT TTTCGCGTCT CGGAACCCGG ACCCAGCGAC TGTTGCTCAC CGGGACGTTC
GCGAGCTTCG TCGCGATTGC GGCTGTCAAC GCTGTCCGTC CCGTCTTCCC TGGAATGGGG
ACGACGCCGG ACGCAGTCGT ATTGCTGGTG CTGCCCCTGT TGATTCCGCT CACGATCGGG
GCCTGGGCGG TCCCGCTGGG TGACCGTTCG ATGCCCGAAT GGCTCGCGCT GTTGGCACTC
CTTGGAGCCG GGTTCGCCAT CGCGGGCATG TCATTCACCG CGACGCTCAC TCCTGAATAC
TACAACACTG CCTATCGCGT CCAGACGTTC CTTCATCTCC CGATCGCCGT CTTCGTCGCG
CTCGGGATCG GCACGCTGCT GGATCGAATG GGTCGAGTGG TGCCCCGCCA GTCATGGCGA
CAGGGAGTGT CCACTGTGGC AGTCGTTGGG GTAGTGATCT GTATGGCGAT CTCCATTCCG
GTGGCGTTCG CCGGCTTGGA GTACCTTCCC TACAAGGGCG TCACGACGTC AGGGGAGTTC
GCGGCCGCCG AGTTCAGCGT CACGTCGCTG CCGGAGTGGA CCAGCGACGA TCATATTTCG
CGTGTTTCCC GATACTTTTC GCCGGGGAAC TCCGGGACGA ACACGACACT CCATCGCGTG
GCCCCCGTTT TCGACTGGAT CGAGGGCGGC CCGCCGCCGG GCTGTCCGAC AGTCGTCCAG
TCCTCCTGGA CGACGACTGG CGCACAGGTG TTTCCCCAAC CCCCGATCGT GATCGACGAC
GGCCGTCTCT GGAAGTACAT GCACGCGAAC GATCGCATCT ACAGCAATTC GGCACCCGAT
CCGCTCACGA TCGTCCGTCC ACCCGGTCTG TCGAGAAGTT GCTGA
|
|---|
| Protein sequence | MIGPDRGHST GASCLWAPVR LSRAQYLLGL LAAFSVAVAL RMGPLFWSPL PFNPDGIVYA
GLVRETIATG HLPLDGLPAD SFHFTTMLAI WETVVGHPSR FLSQPVIAIV GALPSLVAAV
FAHRLTGRLG WSLSGRRLAG SLASLLLAVD GVYLHRSMPV DEQTVGLLVV PLAALVLARS
MPDGRRRWYV VLGALLVSLP PLHNLDSMVA LFALVLVVCV RRVSVRTLLV GGLVALGFLG
YFVGYSWGIA ALTPATVIQS QRISYAPGLL AAWLILVGLL LARFSRLGTR TQRLLLTGTF
ASFVAIAAVN AVRPVFPGMG TTPDAVVLLV LPLLIPLTIG AWAVPLGDRS MPEWLALLAL
LGAGFAIAGM SFTATLTPEY YNTAYRVQTF LHLPIAVFVA LGIGTLLDRM GRVVPRQSWR
QGVSTVAVVG VVICMAISIP VAFAGLEYLP YKGVTTSGEF AAAEFSVTSL PEWTSDDHIS
RVSRYFSPGN SGTNTTLHRV APVFDWIEGG PPPGCPTVVQ SSWTTTGAQV FPQPPIVIDD
GRLWKYMHAN DRIYSNSAPD PLTIVRPPGL SRSC
|
|---|
| |