| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1010 |
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| Symbol | |
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| ID | 8383283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 974748 |
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| End bp | 975884 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644972074 |
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| Product | NMD3 family protein |
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| Protein accession | YP_003129926 |
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| Protein GI | 257052093 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGAT CGGGTGCGTT CTGTCCGCGG TGTGGCGATG CGATCGAGAG CGACCCGACC
GAGCGGCCGG GCCAGCCTGG CGCGCACGAT CCCGACAGCG TGCTGTGTGA CGCCTGCTAC
TTCGAGGAGT TCGACCTCGT GGACGCGCCC GAGCGGATCG AGGTCCGCGT CTGTTCGCGG
TGTGGGGCCG TCCACCGGGG CAATCGGTGG CTCGACGTCG GTGCGGAGGA CTACACCGAC
GTCGCGATCG AGGAAACCAG CGAGTCGCTG GGTGTCCACC TCGATGCGAC CGACGTCTCC
TGGCAGGTCG CGCCCGAGCA GGTCGACCGC AACACGATCC GGATGCACGC GACGTTTTCG
GGGGTCGTCC GCGGGACGGC GGTCACCGAG GAGGTGGTCG TCCCCGTGAA GGTCTCCCGG
CAAGTCTGCA CGCGGTGTGG CCGGATCGCC GGTGGGTCCT ACGCCTCGAC CGTCCAGGTG
CGGGCACGCG ACCGGACGCC GACCGACGAC GAGATCGAAC GTGCCAAAGC GATCGCCCAC
GAAATCGTCG CCGACATGGA AGCGACGGGC GCTCGTGACG CGTTCGTCAC CGAGGTCGGC
GAGGACGACG ACGGGGTGAA CATCAAGGTC TCGACGACGA ACATCGGCAA GCAGATCGCC
AGCCGGATCG TCGGCGAGTT CGGCGGATCC TTCTCGGACT CGGAGACGCT GATCACCGAG
GACGAGGACG GCAACGAAGT CTACCGGGTG ACCTACGCCG TCCGGTTGCC GCCCTATCGA
CCAGGCGAGG TTATCGACCC GGAGGACAGT GACGGGCCGG TCATCGTTCG GAGCGTCCAG
GGCAATCTCA AGGGAACGCG GCTGAAGACC GGCGACGCCT ACGAGGCGAG TTTCGAGGCG
GGTAATGCAC CCGACGCCCG ACGGCTTGGC GATCAATCCG ACGGCGTCGA GACGACGCTG
GTGGCGATCG AGGACGACCA CGCCGTGCAG GTGCTCGATC CCGAGACCTA CGAGACCAAA
TCGATCCCGC GACCGGACTA TCTCGACGCC GACGCCGAGA CAGTTCCGGT GTTGAAATCG
CGAGCCGGGT TGCACGTCCT CCCGAGCGGC GAGGCGGACG AGATCAACGA TGAGTGA
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| Protein sequence | MTRSGAFCPR CGDAIESDPT ERPGQPGAHD PDSVLCDACY FEEFDLVDAP ERIEVRVCSR
CGAVHRGNRW LDVGAEDYTD VAIEETSESL GVHLDATDVS WQVAPEQVDR NTIRMHATFS
GVVRGTAVTE EVVVPVKVSR QVCTRCGRIA GGSYASTVQV RARDRTPTDD EIERAKAIAH
EIVADMEATG ARDAFVTEVG EDDDGVNIKV STTNIGKQIA SRIVGEFGGS FSDSETLITE
DEDGNEVYRV TYAVRLPPYR PGEVIDPEDS DGPVIVRSVQ GNLKGTRLKT GDAYEASFEA
GNAPDARRLG DQSDGVETTL VAIEDDHAVQ VLDPETYETK SIPRPDYLDA DAETVPVLKS
RAGLHVLPSG EADEINDE
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