| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1003 |
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| Symbol | |
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| ID | 8383276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 968159 |
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| End bp | 968914 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644972067 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003129919 |
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| Protein GI | 257052086 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGG AACCCGAAGA CCACGAGTTC TCGGAGGGGC AGGGCTTTTC AGAGCCCTAC
GAAGGGTTCG ACCTCGAACC GCCGGAACTC AACGTCGACC CCGACAGCGT CGACCCGGTC
GACTCCCGCG TCGTGAGCGA CCTCCTCGAC GAGCGATCGA TCGGTGGGGA CGAAGTCGAC
GCCGAGGAAT TGCTCGACGT CGGCATCAGC TACACTCGGA TCCAGCGCTT CGAGGAGGCG
ACCGAGACCC TCGAACGCGC CGCCCGCTAC GCCGAGGACG ACTCGGTCGC ACAGGAGGCC
TGGGCGAACA AAGGAGCCGC CCACGCCGAG TTGGAGGAGT ACGACGCCGC GATGGGGGCC
TACCGCGAGG CGATCGAGAT CGATCCCGAC TCCGAGCACG CCGCGACGGC CGAGACCAAC
CTCGCGTACG CGCTCTGGGA GTCCGGCCGC TCCGAGCAGG CGCTCGAACA CGCCGAGCGC
GCCGTCGAGA TCGACCCCCG ATTCCCGCAG GCGTGGTACA ACCGCGGCTT CTTCCTGCTC
GAACGCGGCC TCGCAGAGGA AGCCATCGAC GCCTTCGACA ACGCCATCCG CCTCGGGTTC
CGCAACGCGA CCCTCCTGGA GGAGAAAGCC CGCGCCCACG AGGAGGTCGG CGAGGACGAA
CGCGCCGAGG AACTCGTCGA GGAGGCCGAA GAGCTCCGCC AGGAGACCGA AGAGGAGTTG
ATCGACGACG GCGCACAGAC GGAACTCTAC GAGTAA
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| Protein sequence | MTEEPEDHEF SEGQGFSEPY EGFDLEPPEL NVDPDSVDPV DSRVVSDLLD ERSIGGDEVD
AEELLDVGIS YTRIQRFEEA TETLERAARY AEDDSVAQEA WANKGAAHAE LEEYDAAMGA
YREAIEIDPD SEHAATAETN LAYALWESGR SEQALEHAER AVEIDPRFPQ AWYNRGFFLL
ERGLAEEAID AFDNAIRLGF RNATLLEEKA RAHEEVGEDE RAEELVEEAE ELRQETEEEL
IDDGAQTELY E
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