Gene Huta_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0987 
Symbol 
ID8383260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp949519 
End bp950376 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content63% 
IMG OID644972051 
ProductProtein of unknown function DUF439 
Protein accessionYP_003129903 
Protein GI257052070 
COG category[S] Function unknown 
COG ID[COG2469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGG AAGAACGAAA GATCCTGGAC ATCGCCGGAG ACTACCGGCA GGTCCGCCGC 
GACGGCCAGC CGGTCGAGGA TCCCGACTGG CAGTCCGCAC GGATCGTCCT GACGGACAGA
CGGCTCGTCC TCGCGGGCAA CGGATCGAAC CGGACGATCC CCCACGGGCG GGTCACGATC
CCGGACGACC TCGATGGGGC CGAAAACGCC GCCGAGACGC TCGTTTTGCA AATGGGCTCG
ACCGTGATCG AAGTGTCCCC CGCGGGTGAG ACGGATTTTC AAGACGCGTA CTATCGGGCA
AACCTCGCCG GCGAGGTCGT CCTCGTGAAT CATCCAGCAG TCGTCGGCGG TGTCGTCCAG
GAGGACGCAG CGTGGGAGAA AGCGAAGTTC TCGACCACCG AAGACGGGTT CTCGCTGACG
TTTCCCGGCG GGGATCGCGT CAGGTGTGAC TTCGCTGACG TCGGGACCGT CGAGACGGGA
TCGCGATCGG TCATGGGAGA GACACGACCG GTCGTCGAGA TCGAACACAC CGACGATGAT
GACCGGAGCG TCGAGACCCA CCTCTCCGGG ACGGAGCGAC ACACGTCCGT CCTCCGGGAA
CTGTTCGAGG AACGCGTCGC CGAACGCGAC GAGGATTACG AACTCACCGA GACAGAGAGC
CAGGTGTTGA TGGCACTGTA CTCCGGCGTC TCCCCGTTCG AGATGAGCGA CTTCGTCGGC
CTCAGCGTCG ATGAAGTCGA AGAAATCTAC CAGAAGCTGC TCGACGTCGG TGCGGTCGAC
AAAGTCCGCA CCCGCACGGA AGTCTCACTC AACGCTCAGG GCCGCAACAT GGCCAGCGAG
GCGATGAGCG AGCAGTGA
 
Protein sequence
MSEEERKILD IAGDYRQVRR DGQPVEDPDW QSARIVLTDR RLVLAGNGSN RTIPHGRVTI 
PDDLDGAENA AETLVLQMGS TVIEVSPAGE TDFQDAYYRA NLAGEVVLVN HPAVVGGVVQ
EDAAWEKAKF STTEDGFSLT FPGGDRVRCD FADVGTVETG SRSVMGETRP VVEIEHTDDD
DRSVETHLSG TERHTSVLRE LFEERVAERD EDYELTETES QVLMALYSGV SPFEMSDFVG
LSVDEVEEIY QKLLDVGAVD KVRTRTEVSL NAQGRNMASE AMSEQ