| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0986 |
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| Symbol | |
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| ID | 8383259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 947994 |
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| End bp | 949343 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644972050 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_003129902 |
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| Protein GI | 257052069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCC TCGAATTCGC CCGGGCCGCC CGCGCGACCG GCCCGCTCTG TGACGCGTGT
CTCGGCCGGC CGGTCGCCGA CCGGAGCTTC GGACTCACGA ACACCGAGCG CGGCCGTGCG
TTACGGACCA CCGTCGCACT GGACGACGAC GAACCGATCG ACGCTCCCGA CGAGTGCTGG
GTGTGTGAGG GTGCCTGCGA GGATTTCGAC GACTGGGCCG ACCGCGCCGC GGACGCCATC
GCCGAATACG ATTTCGACAC CTATCAGGTC GGGACGCGCG TCCCCGCACT GATCGAGGAG
AACGAGCGCT TGCTCAGAGA AGACGCCGGC CTCGCACCCG ACGCGGGCGA ACCGCTCAAG
GGGGAGTTCA ACCGCGAGGT CGGCAAGCGC CTGGGCGGGC AGATCGACGC CGAGGTCGAC
TTCGATCGGC CGGACGTCCA GTTGCTTCTG GACCTCGACG CTGACCAGAT CGAGGTCCAG
GTCAACTCGG CGTTCGTCTA CGGTCGCTAC CGAAAGATCA AGCGCGACAT CCCACAGACT
GAGTGGCCCT GCAACGACTG CAACGCCACC GGCACCGTCG ACGGCGAGCC CTGTGAGGGC
TGTGGCGGAA CGGGCTATCG CTACGACGAG AGCGTCGAGG AACTCACCGC GCCGGTCGTC
CGCGAGGCGA TGGACGGTTC CCGGGCGGTC TTCCACGGAG CCGGCCGCGA GGACGTCGAC
GCGCGCATGC TCGGCACCGG TCGCCCGTTC GTGATCGAGG TCAAGGAACC CCGGACGCGC
GACGTGGATG TCGGCGACCT CCAGGACGAC ATCAACGAGT TCGCCGATGG GAAGGTCGAA
GTCGACGGGC TCGCCCTCGC GACCCACGAC ATGGTCGAGC GCGTCAAGGC ACACGATGCG
AGCAAGACCT ACCGGATGAC GGTCGCGCTC GACAAGGATG TCGACGCGCC GACCCTCGAA
GCGGCCCTCG CGGAACTCGA AGGGAAGACG ATCGAGCAGC GGACGCCAAA CCGCGTTGCT
CACCGCCGCG GCGACATCGT CCGCACGCGT GACGTCTACG CCATCGATGG CAAACTCGAC
CCGGACGGGG CGGGGATGGA CCTGTCCGTC GGAGCGGAAG CCGACGACTC CGGCACGTCC
ACAGCCAACC ACGCGACGAT CGAGGTCCAC GGCGAGGGGG GCCTCTACGT GAAGGAACTG
ATCTCGGGGG ACGAGGGCCG AACGGAGCCG AGTCTTGCCG GAGTACTCGA CACGCCCGCT
GAGGTGACAG CTCTCGACGT CCTCCAGGTC GAGGGCGAGG ACGAACCGTT CGAACGCGAG
GCGTTCTTCC GGGACGCCCG AGCGGAATGA
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| Protein sequence | MDLLEFARAA RATGPLCDAC LGRPVADRSF GLTNTERGRA LRTTVALDDD EPIDAPDECW
VCEGACEDFD DWADRAADAI AEYDFDTYQV GTRVPALIEE NERLLREDAG LAPDAGEPLK
GEFNREVGKR LGGQIDAEVD FDRPDVQLLL DLDADQIEVQ VNSAFVYGRY RKIKRDIPQT
EWPCNDCNAT GTVDGEPCEG CGGTGYRYDE SVEELTAPVV REAMDGSRAV FHGAGREDVD
ARMLGTGRPF VIEVKEPRTR DVDVGDLQDD INEFADGKVE VDGLALATHD MVERVKAHDA
SKTYRMTVAL DKDVDAPTLE AALAELEGKT IEQRTPNRVA HRRGDIVRTR DVYAIDGKLD
PDGAGMDLSV GAEADDSGTS TANHATIEVH GEGGLYVKEL ISGDEGRTEP SLAGVLDTPA
EVTALDVLQV EGEDEPFERE AFFRDARAE
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