Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0966 |
Symbol | |
ID | 8383239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 930471 |
End bp | 930923 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644972030 |
Product | UspA domain protein |
Protein accession | YP_003129882 |
Protein GI | 257052049 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTCG AAATCGACAC GATACTGGTA CCGGTCGACG GCACGGACCG TTCTGATCGG GCCGTCAAGC ACGCATTGCC GATCGCCGAC CGGTACGATG CCGAGGTACA CATCCTGTAC GTGATCGAGG AGACGGTCGC TGCGGGGCTC GAACAGGGAG ATATCGAAGC CGACAGTGTC GCGAACGAAC ACCGGGCGTT CATGGACGCC GTCCGGGAAC AGGTGCGTGC GGACGGCCAC AACATCGACC TCTCACAGTC GACCGTCTTT GGCTATTCGG CAAGTTCACT GACTCGGCAC CCAGTCAGCG TCGTGTTGGA CGCCGCCGAG GACATCGGCG CGGACTTCAT CGTCATTCCC CGCCAGTCCG TCATGGACGA ACCTGGCGCA ATGCTCGGCA AAGTCGCCGA ATACGTCCTC ACGTACGCGA GTCAACCCGT TCTCTCGGTC TAG
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Protein sequence | MAVEIDTILV PVDGTDRSDR AVKHALPIAD RYDAEVHILY VIEETVAAGL EQGDIEADSV ANEHRAFMDA VREQVRADGH NIDLSQSTVF GYSASSLTRH PVSVVLDAAE DIGADFIVIP RQSVMDEPGA MLGKVAEYVL TYASQPVLSV
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