Gene Huta_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0939 
Symbol 
ID8383212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp904952 
End bp905815 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content60% 
IMG OID644972003 
ProductProtein of unknown function DUF439 
Protein accessionYP_003129855 
Protein GI257052022 
COG category[S] Function unknown 
COG ID[COG2469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.833029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGG GTGAACGCAA ACTCGCCGAC AGCCGGGGCA AATTCGTCCA GGTAGTCGAG 
AATGGCCGCA AACTCAACGA CGTCGAGTGG CTCCCGGGCC GGATTCTGCT CTCGAACAAG
CGTCTGGTAC TGGCGAGCAA CGAGGGCAAG AAAACGGTCT CTCTCGCGGA GATCCGGAGC
GTCAAGACCC GGAAAAACGT CAATGAGGCG ATCGCCAACG TTTCGGGATA CGTCTCGGTT
CAGACTGGCC GGGACGTGCT GTTGCTCTCT CCGTCCGACG TGGACGAGTT CGCGTCAGAG
ATCTACAGCG CCCGCCTGGA TCAACAGGTC GTCCTCGCGA AACACCCCGC GGTCAAGGGT
GGCGTCGTCC AGGACGCCCC CTGGGAGAAA GCGCGGATCA AAGTCGGCGA GGAATCCGTC
GAACTTGCGA TCTCGAGCGG GCAGTTCGTC GAGATCGAAC TCAGCGACGT CGGCACCATC
GACGAGACCG AACGTACCGT TCTGGAGAAA CAGCGGAGCG TCCTCGAAGT CGAACATGCC
ATCGACGGGA CGAGCGTCAA AACCTATCTG TCAGGGTCGG CGAGTGACTG CTCGATCCTC
GCGTCGTTGC TTCGCTCCGG GGACCAACAC GTCGAGTCCG ACCTCGAGTT GAGCGACGCG
GAACGCGAAG TGTTGATGGC GCTCTATTCG GGTGTTTCTC CGTTCGAGAT CCCCGATTTT
GTGGGTCTGG ATATCGCGGA GGTCGAGGAT ATCTTCGATC AACTCGCCGA ACAGGGCGTG
GTGAAACAGA AGCGAACCCG ACGGGAGGTC GGACTCAAAC CCAGGGGTCG ATCGATCGCG
AGCGAAGTCA TCGCGGATCA GTGA
 
Protein sequence
MSEGERKLAD SRGKFVQVVE NGRKLNDVEW LPGRILLSNK RLVLASNEGK KTVSLAEIRS 
VKTRKNVNEA IANVSGYVSV QTGRDVLLLS PSDVDEFASE IYSARLDQQV VLAKHPAVKG
GVVQDAPWEK ARIKVGEESV ELAISSGQFV EIELSDVGTI DETERTVLEK QRSVLEVEHA
IDGTSVKTYL SGSASDCSIL ASLLRSGDQH VESDLELSDA EREVLMALYS GVSPFEIPDF
VGLDIAEVED IFDQLAEQGV VKQKRTRREV GLKPRGRSIA SEVIADQ