Gene Huta_0643 details

Gene Information

• Locus tag: Huta_0643
• ID: 8382911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 641438
• End bp: 642058
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644971706
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_003129563
• Protein GI: 257051730
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGT TCGATGCGGA CATCCCCGAA GTGCGCGAAG TGACGGGAAC GGGCGTCCCC 
ATCCGGGGCA ACGACATCGA CACTGACCAG ATCATCCCCG CGCGCTTCAT GAAGGTCGTC 
ACCTTCGACG GCCTGGGGCA GTTCGCCTTC TTCGACGTCC GCTACGACGA CGAGGACAAC 
CAGAAAGAGC ACCCGATGAA CGAGGATCGG TTCCGGGACG CCAACGTGAT GGTCGTCAAC 
GACAACTTCG GGTGTGGATC CTCGCGAGAA CACGCCCCCC AGGCGTTGAT GCGCTGGGGG 
ATCGACGCCT TCATCGGCGA GTCCTTCGCC GAAATCTTCG CGGGCAACTG CCTCGCACTC 
GGGATGCCGA CCGTGACGGC CGATCAGGAG ACGATCGCCG ACCTCCAGGA CTGGGTCGAA 
GAGAACCCGG ACGGCGAGAT CGACATCGAC GTCGAGAGTG AGACCGTTAC CTACGGCGGC 
CAGACCGTCG AGGTCACGGT CGACGACGCA CAGCGTCAGG CCCTGGTCGA GGGGATCTGG 
GACACGACAG CGCTGATGAG TGCCAACGAA AACGAGATCG AGCGGACGGC AACGTCGCTG 
CCCTACGTCG GGAACACGTA G 

 

Protein sequence

MSEFDADIPE VREVTGTGVP IRGNDIDTDQ IIPARFMKVV TFDGLGQFAF FDVRYDDEDN 
QKEHPMNEDR FRDANVMVVN DNFGCGSSRE HAPQALMRWG IDAFIGESFA EIFAGNCLAL 
GMPTVTADQE TIADLQDWVE ENPDGEIDID VESETVTYGG QTVEVTVDDA QRQALVEGIW 
DTTALMSANE NEIERTATSL PYVGNT