| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0620 |
|---|
| Symbol | |
|---|
| ID | 8382888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 622094 |
|---|
| End bp | 622708 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644971683 |
|---|
| Product | methylase |
|---|
| Protein accession | YP_003129540 |
|---|
| Protein GI | 257051707 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00537] HemK-related putative methylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.532955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG CCGAGGAGCC GGCTGACGCC GAAGCGACCG ATCGACCGTC CCTGGCCGAG
CAGCGCGGGG TCGACGCTGT GTACGGCGCG AGTGAAGACT CCCATCTGCT CGCGGAGGCT
GCCGTCGAGG GAGCGACGGC GGGCGAGCGA GCGATCGATG TCGGGACTGG ATCGGGATAC
GTCGCGAGCG CGCTCGCCGA AGCGGGCGTC GAGGTGGTCG GGACGGATCT CAACCCGGCT
GCCTGCCAAC AGGCACGCGA TGCCGGGATC CCGGTCGCGC GGGCGAACCT GCTCGATCCG
TTCCTGGCTG ATAGCTTCGA TCTGGTGACG TTCAATCCGC CATATCTCCC GTCGACGCCC
GACACGGAGT GGGGCGACTG GATGCAAACG GCTCTATCCG GTGGCGAGGA CGGTCGCGCG
GCCGTCGATC CGTTTCTGGC GGACGTTGGT CGCGTGCTCG AAGATGGCGG TCGAGCGCTC
CTGTTGGTCA GCAGTCTGAC CGGGATCGAG GCGGTACAAG AGTACGCCAC AGCGCAGGGC
CTCGAATCGT CGATCGTCGC CGAGGAATCC TTTCCGTTCG AGCGGCTGGT CGTCTTGCGG
TGTGTGCCGA GGTAG
|
|---|
| Protein sequence | MTDAEEPADA EATDRPSLAE QRGVDAVYGA SEDSHLLAEA AVEGATAGER AIDVGTGSGY
VASALAEAGV EVVGTDLNPA ACQQARDAGI PVARANLLDP FLADSFDLVT FNPPYLPSTP
DTEWGDWMQT ALSGGEDGRA AVDPFLADVG RVLEDGGRAL LLVSSLTGIE AVQEYATAQG
LESSIVAEES FPFERLVVLR CVPR
|
|---|
| |