Gene Huta_0504 details

Gene Information

• Locus tag: Huta_0504
• ID: 8382771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 510779
• End bp: 511468
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644971566
• Product: glutamate/valine-rich protein
• Protein accession: YP_003129424
• Protein GI: 257051591

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.33286
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAAC AACAGACAGA CGCCCTGGTT GACCTCGTTT ATGGGGCGTT GATCTTCGTC 
TCGGTTGTGC TGATTGTCGT CGTTGACAAC GATGTGGGGA TCGCGTTCGG CATCGGCGTG 
CTGGTATCGT ACTTCGTTCA CGTCGCCTGG AAGATGTCAC AGTACGATCC GGACTGGATG 
GTTTCGGCCG TCGAACAGAC CGTCGAAGAG ACAGTCGACG AGACGGTCGA GAAGCAAGTG 
GGTGATACCG TCGAGTCCAC CGTCAAGGAA ACGGTCGACC AGCAAGTCGG CGAGACTGTC 
GAGGAAACGA TCGGCGAAAC GGTCGGCGAG TCAGTCAACG AGACGGTCGA GGAAACAGTC 
GAAGCGGCTG TCGACGAAAC GGTCGGTGAA TCGGTCGAAG AGACGGTCGA GGAAACAGTC 
GAAGCGGCAG TCGATGAAAC AGTGGGTGAA TCCGTCGAGG AAACCGTCGA GGAGACGGTC 
GAAGAAACCG TCGGTGAAAC TGTCGAAGAG ACAGTCGAAG CGGCGGTCGA CGAGTCGGTT 
GGCAAGACAG TCGAGGAGAA GGTCGAGGAA ACCGTCGAGA AAACGGTCGA GGAGAAAGTC 
GAAGAAACGG TCGAGGAGAA AGTCGACGAA TCCGTCGTTG ACACGGACGA AGACGACTCG 
GCCGACGGCT CGGATTCAAA CGACAACTGA 

 

Protein sequence

MNQQQTDALV DLVYGALIFV SVVLIVVVDN DVGIAFGIGV LVSYFVHVAW KMSQYDPDWM 
VSAVEQTVEE TVDETVEKQV GDTVESTVKE TVDQQVGETV EETIGETVGE SVNETVEETV 
EAAVDETVGE SVEETVEETV EAAVDETVGE SVEETVEETV EETVGETVEE TVEAAVDESV 
GKTVEEKVEE TVEKTVEEKV EETVEEKVDE SVVDTDEDDS ADGSDSNDN