| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0426 |
|---|
| Symbol | |
|---|
| ID | 8382693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 418302 |
|---|
| End bp | 419219 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644971488 |
|---|
| Product | GMP synthase subunit B |
|---|
| Protein accession | YP_003129346 |
|---|
| Protein GI | 257051513 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.628115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGACG TCGAGACGTT CATCCCGGAG GCGAAAGCCG AGATCGACGC ACAGATCGGG
GACAGCAAGG CCGTGATCGC CCTCTCCGGT GGCGTCGACT CCTCGACGGC TGCTGCGCTT
GCCTACGACG CGATCGGCGA CCAGCTGACG CCAGTGTACG TCGACACTGG CCTGATGCGC
AAGGGCGAGA CTGAGCAGAT CCGCGAGACG TTCGACTACA TGGACAGTCT CCGGATCGTC
GACGCCACGG ACCGCTTTCT CGACGAACTC GAAGGCGTGA CCGATCCCGA GGAGAAACGC
CACGCCATCG GCGAACAGTT CATCCGGGAG TTCGAGACGG TCGCCCGCGA GGTCGACGCT
GACTATCTCG TCCAGGGGAC GATCTATCCC GACCGCATCG AGAGCGAGGG GACGATCAAA
TCCCATCACA ACGTCGGCGG GCTGCCCGAC GTCGTCGACT TCGACGGGAT CGTCGAACCC
ATGCGTGACC TCTACAAGGA CGAGGTCCGG GAGGTCGCCC GCGAACTCGA CCTGGAGGAG
ATCATCAGCG AGCGGATGCC CTTCCCCGGG CCCGGTCTCG CCGTGCGGAT CATCGGCGAG
GTGACCGCGG AGAAACTCGA CGTGGCCCGG GAGGCCAACC ACGTCGTCGA GGAGGAACTC
GAGGAATACG AGCCCTGGCA GGCCCTGGCC GCTGTCATCG GCAAGGCCAC CGGCGTGAAG
GGCGACAACC GCGTCCACGG CTGGGTCGTC GCCGTCCGAT CGGTCGAATC TCGTGACGGC
ATGACCGCTC GCGCCCAGGA GATCGACTGG GAGACCCTCC AGCGCATCCA GAGTCGCATC
ACCGGCGAGA ACGAGAACGT CTCGCGGGTC GTCTACGACG TGACCCACAA ACCGCCCGCG
ACCATCGAGT ACGAGTGA
|
|---|
| Protein sequence | MVDVETFIPE AKAEIDAQIG DSKAVIALSG GVDSSTAAAL AYDAIGDQLT PVYVDTGLMR
KGETEQIRET FDYMDSLRIV DATDRFLDEL EGVTDPEEKR HAIGEQFIRE FETVAREVDA
DYLVQGTIYP DRIESEGTIK SHHNVGGLPD VVDFDGIVEP MRDLYKDEVR EVARELDLEE
IISERMPFPG PGLAVRIIGE VTAEKLDVAR EANHVVEEEL EEYEPWQALA AVIGKATGVK
GDNRVHGWVV AVRSVESRDG MTARAQEIDW ETLQRIQSRI TGENENVSRV VYDVTHKPPA
TIEYE
|
|---|
| |