Gene Huta_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0417 
Symbol 
ID8382684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp411917 
End bp412960 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content65% 
IMG OID644971479 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_003129337 
Protein GI257051504 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATG CCTATGTGGC CCTGGAGGGT GAGCGCGTCG TCGAAGCCCG CGCTCGCTCG 
CCGGGAACGG CCCGTGGCGA ACTGGTCTTT ACGACTGCCT ACACCGGCTA CGAGGAGAGC 
CTGACGGACC CCTCCTACGA GGAACAGATC CTCACCTTCT CGTACCCACT GATCGGGAAC 
TACGGAGTCC GCGAGGAGCG ATTCGAGTCC GATCGCGTCC ACCCGCGCGC GGTCGTCGCC 
CGCGAGTTGA CCGACGACGT CGCCGAGTGG CTCCAGACTG AGGGGCGGCC CGCCGTCGAT 
CACATCGACA CGCGCGAACT CGTGACCGAG ATCCGCGACG AGGGCGCGAT GAAGTGCGGG 
ATCGCGGCCG GTGAGGATGC CACCGAGGAA GATGCCCTGG CCGAACTCCG GCAGTGCAAG 
CACATGAGCG ACCACGCGGA CATCGGGAAC CAGGTCAGCG TGAGTGAACC CGTCGTCTAC 
AACGAAGGCG GCGACGGCCC CGATGTCGCG CTGATCGACT GTGGCGCGAA GGGCTCGATC 
CAGGAGTCAC TGGTCGAACG CGATGCGGTC GTCCACGTCC TGCCGTACGA CACGACGCCC 
GAAGCGGTCC AGGATCTGGA CCCCGATCTC CTCTTCATTT CGAACGGGCC CGGCGATCCC 
GAGAACTTCG AGGCCGCGGC CGAACTCGTC GACGAATACG TCGGGGATCT CCCGCTGGCT 
GGTATCTGTC TCGGCCAGCA GGTCGTCGCG AACGCCCTCG GTGGCGACAC CGAGAAGATG 
GAGTTCGGCC ACCGCGGCGT CAATCAACCG GTCCGCGATC TCCGGACCGA CCAGGTCGTG 
ATGACGACCC AGAACCACGG CTACACGGTG GCCGATCCCG GCGAGACGCT CGAGGTGACC 
CAGATCAACG TCAATGACGA CACGCCGGAA GGCTTAGAAA ACGACGACCT GAACATCATC 
ACCCGCCAGT ACCACCCCGA GGCGAATCCG GGCCCCAACG ACTCGCTTGC GTTTTTCGAC 
GACGTGCTCG CACTGGTCGA GTAG
 
Protein sequence
MTDAYVALEG ERVVEARARS PGTARGELVF TTAYTGYEES LTDPSYEEQI LTFSYPLIGN 
YGVREERFES DRVHPRAVVA RELTDDVAEW LQTEGRPAVD HIDTRELVTE IRDEGAMKCG 
IAAGEDATEE DALAELRQCK HMSDHADIGN QVSVSEPVVY NEGGDGPDVA LIDCGAKGSI 
QESLVERDAV VHVLPYDTTP EAVQDLDPDL LFISNGPGDP ENFEAAAELV DEYVGDLPLA 
GICLGQQVVA NALGGDTEKM EFGHRGVNQP VRDLRTDQVV MTTQNHGYTV ADPGETLEVT 
QINVNDDTPE GLENDDLNII TRQYHPEANP GPNDSLAFFD DVLALVE