Gene Huta_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0231 
Symbol 
ID8382493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp225481 
End bp225801 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content62% 
IMG OID644971289 
Producttranscription termination factor Tfs 
Protein accessionYP_003129152 
Protein GI257051319 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID[TIGR01384] transcription factor S, archaeal 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.309601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCT GCGACGAGTG CGGTTCGATG ATGAAGACCG AGGGAGACAT GTGGGTCTGT 
GGAAGCTGCG GTGCCGAAAC GCCGCGGGAA GCAGCCACGG AGAGCGGCAT GGTCACAACC
CAGGGGCAGG AGGCTGGCGA AGTCGTCGAT CTCAGTGACA GTGAGGCGGA CGCCCGGCCG
ACGACCGAGA TCCAGTGTGT GGAGTGTGAC AACGACCGTG CCTACTGGGA GTTGAAACAG
ATCCGCGCCG CCGACGAGTC CGAAACCCGC TTTTTCACCT GTACCGAGTG CGGCCACAAG
TGGCGCGAGG ACGATCACTG A
 
Protein sequence
MEFCDECGSM MKTEGDMWVC GSCGAETPRE AATESGMVTT QGQEAGEVVD LSDSEADARP 
TTEIQCVECD NDRAYWELKQ IRAADESETR FFTCTECGHK WREDDH