Gene Huta_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0196 
Symbol 
ID8382458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp193396 
End bp193776 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content67% 
IMG OID644971254 
Productanti-sigma-factor antagonist 
Protein accessionYP_003129117 
Protein GI257051284 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0995683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCGG CCGATCCCGC GATCACCCGA GTGTTCGACG TGCTGGTCGC GAGGTTCCCG 
AGCCAGCCCA CCGACCAGGC GGTCGACGAG CTCAGGGCGG CGGTGTTGGC GGAGATAGAG
GAGTCGAACC CGAACGGCGT CGTCCTCGAT ATCTCGGGCG TGAATACGCT GGATTCGTTT
TTCGCCCGCG TCATCGCAGA GACGGCGGCG ATGGTCGAGC TGATGGGCGG GACAGCCATC
GTCGCCGGGA TGCGGCCGAG CGTCGCGATC ACCGCCGCCG AACTCGGCTT CGACCTCGGG
GGCGTCGAAA CGGCGCGGGA TACCGATCAC GCCCTCTCGC AGTTAGGGGT CCGTGCCGCC
GAGGAGACAC GCAATGAATG A
 
Protein sequence
MTAADPAITR VFDVLVARFP SQPTDQAVDE LRAAVLAEIE ESNPNGVVLD ISGVNTLDSF 
FARVIAETAA MVELMGGTAI VAGMRPSVAI TAAELGFDLG GVETARDTDH ALSQLGVRAA
EETRNE