| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0192 |
|---|
| Symbol | |
|---|
| ID | 8382454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 189047 |
|---|
| End bp | 190390 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644971250 |
|---|
| Product | protein of unknown function DUF92 transmembrane |
|---|
| Protein accession | YP_003129113 |
|---|
| Protein GI | 257051280 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1836] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00297] conserved hypothetical protein TIGR00297 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.23959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCCG CGCTCCGACG TGCGGTAGCG TTCGCACTTG TCGGGTTCGC CAGCGTGATC
GCTCCCGTTG CCGACCGGCT GTTCGCCCCG GATATCGCGA CACTGGTAGC GGCCGTTCCG
TTCCTCTTGC TGACTGGCGG ATTGCACGTG GTTGAATCGG GCGTTATCTT CGAGTTGTTC
GCGCGACCGG GCGACCGCCG GGACGGCCGA CTCTACGGGC TGGCCGGCTT CTCACTGTCG
ATCGCCGCCC TGATTCTGCT CGCAATCCAG TTCGACATGC CAACAGCCGT TCCAGTGGCC
GCGACACTGA TCCTGAGCGT CGGCAACGTC GGCGCGCACG TGGTTCGGGC CCAGGGCGGG
GAACCGATCG TCGCCACGGC CGGATTCGTC GTCGCTGGCT TCCTTGCTGG GTTCGGGAGC
TTCGTGCTCT CGGGTTCGAT CAGTGGCGGC CGCCCGGCGT TTCCGGTCCT GGTCTTTCTG
GCTGCAAGCG GGGCCCTGCT CGCCGCGTTG CTTAGATCGA TGTTGTTCGA GCGGGACGAT
CCGCTGGTGA TCATTTCGGT CGGCCTCCTG TTGTGGCTGT TTACGGACCT CTCGATATCG
CTTTCGACCT CTGGCATCGC GATCGCACTC GCGATCACGG TCGCGCTGGG GTACGTCTCG
TATGCGCTGG AGACGGCGTC GCTTCCCGGC ATGTTGACCG GGGTACTGTT AAGCCTCCTG
ACGATCGTGA TCGGGGACTA CGGCTGGTTC GCGATGCTGA TCACGTTCTT CGGCGGTGGC
GGGCTGGCAA GCAAATTCAG ATACGACGAG AAAGTCATCC GCGGCATCGC TCAGGAGAAC
GACGGGGCCC GCGGCAGCGG CAACGTCCTC GCGAACTCCC TGATCGCGCT GTTCGCCGTG
TTGGCTGCCG CGGCGAGCCC ACGACTGACC GGTGTGCATC CTGACCTGTT CCTGTTCGTC
TTCGCCGGAT CGGTTGCGGC AGCGATGAGT GACACGCTGT CGAGCGAGTT CGGTGGGCTC
TATGATGCCC CACGACTCAT TACTACCTTC GAACGTGTCG AACCTGGAAC CGACGGCGGG
GTTACCTGGC AGGGTGAACT CGCCGGGATC GCCGGCGCAG GGATCATCGC CGCCATCGCA
TTGCTCCTGT TCGAGACAAT CACACTCGGC GGGGCTGGCG TGATCGTCGC CAGCGGATTC
ATCGGCATGA CTACCGACAG CCTGCTCGGA GCGACGATCG AAGGACGATG GGTCGGCAAC
CAGGGCGTGA ACTTCCTCGC TACGCTCTCG GCCGGGATCG CCGGGGCGGT GCTTGCAGTC
GCTACGAATA TTGTGGCGCT TTGA
|
|---|
| Protein sequence | MTSALRRAVA FALVGFASVI APVADRLFAP DIATLVAAVP FLLLTGGLHV VESGVIFELF
ARPGDRRDGR LYGLAGFSLS IAALILLAIQ FDMPTAVPVA ATLILSVGNV GAHVVRAQGG
EPIVATAGFV VAGFLAGFGS FVLSGSISGG RPAFPVLVFL AASGALLAAL LRSMLFERDD
PLVIISVGLL LWLFTDLSIS LSTSGIAIAL AITVALGYVS YALETASLPG MLTGVLLSLL
TIVIGDYGWF AMLITFFGGG GLASKFRYDE KVIRGIAQEN DGARGSGNVL ANSLIALFAV
LAAAASPRLT GVHPDLFLFV FAGSVAAAMS DTLSSEFGGL YDAPRLITTF ERVEPGTDGG
VTWQGELAGI AGAGIIAAIA LLLFETITLG GAGVIVASGF IGMTTDSLLG ATIEGRWVGN
QGVNFLATLS AGIAGAVLAV ATNIVAL
|
|---|
| |