Gene Huta_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0133 
Symbol 
ID8382395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp129803 
End bp132274 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content64% 
IMG OID644971191 
ProductDNA gyrase, A subunit 
Protein accessionYP_003129054 
Protein GI257051221 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.618865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAG ACGTACCTGA GGGTCCGGGT GTGACTGCCG ACGCCGCACG CGTCGAGCAC 
GTCCGGATCG AAGACGAGAT GGAGCAAAGT TACATCGACT ACGCGATGAG CGTCATCGCC
GGGCGCGCGC TCCCGGATGT CCGTGACGGC CTCAAACCCG TCCATCGGCG CATCCTCTAT
GCGATGCACG AGATGGGTGT CTCCTCGGGG TCGTCTCACC GCAAGTCCTC ATCAGTTGTC
GGCGAGGTGA TGGGTGACTA TCACCCTCAT GGGGACAGCG CGATCTACGA CACCCTGGTG
CGGATGGCCC AGGACTTCTC GATGCGGTAT CCCCTGGTCG ACGGACAGGG CAACTTCGGG
TCGATGGACG GGGATCCGGC TGCCGCGATG CGGTACACTG AGGCCAGGAT GGCCCCGATC
GCCGAGGAGT TGCTCGCGGA CATCGAGAAA GACACCGTCG ACTTCCAGGC CAACTACGAT
GACCGTCTCG AGGAACCCGA GGTACTGCCG TCGGCGTTCC CGAACCTGCT GGTCAACGGC
TCGTCCGGGA TCGCGGTCGG GATGTCCACG AACATCCCCC CGCACAATCT CGGCGAAGTC
ATCGATGCGA CGATCCACCT CATCGACAAC CCCGACGCCG AGGTGACCGA TCTCATGGAG
TACGTCAAGG GGCCGGACTT CCCGACCGGC GCGAACATCG TCGGGAAGAA CGCGATCCAC
GCGGCCTACG CCACGGGCCG GGGTCGACTG ACCGTTCGCG CCGAGTACGA GTTCGAGGAG
ACGGATTCGG GCCGCCCCCG GATCGTGATC ACGGAGATCC CCTTCCAGGA GAACAAGGCC
CGCATGGTCG AGCGGATCGC CGACGACGTC AACGAGGGGA TCATCGAGGG CGTCTCGGAC
CTCCGCGACG AGTCCGACCG GGACGGCGTC CGGGTCGTCA TCGAGTGCAA GCGCGGCGCG
AACGTCGATG TCGTCGAGAA CCAACTGCTC GATCACCACC TCGAATCGAC CTTCGGCGTC
ATCAACCTCG CCCTGGTCGA CGGCGAGCCC CGCGTGCTCA CGTTAAAGGA GACCTTGGAG
GAATACGTCG CCCACCGGAA GGAAGTTGTG CGTCGGCGCT CGGAGTTCGA TCTCGCGGAA
GCCGAGGACC GCGCGCACAT CCTCGAAGGC CGACTGAAAG CCCTCGGGAA CGTCGACAGC
GTCGTCGATC TGATCCGGGA CTCCGAAGAT CGCGACGAGG CCAAGGCCGC GCTCGAAGAA
ACGTTCGACT TCTCGACGGA ACAGGCCCAG CATATCGTCC GAATGCAACT CGGCAGCCTC
ACCTCGATGG AGGCGGCCGA GGTCGAGGAC GAATACGAGG AGGTCGAGGC CGAGATCGAG
CGCTTAGAGA CGATCCTGAA CGACGAAAGC GAGTTGCTCG ACGTCATCAA GGACGAACTC
CGGGCCGTCA AAGACGAATA CGACGACGAT CGACGGACGA GCATCGTCGA GGATGACGGG
ACGGTCACCC GCGAAGATCT CATCCCGGAA GAGGAGTGTC TGGTCGTCGT CACCGAGGAC
GACTACATCA AGCGCATGCC TGCGGACCGC TTCGATGCCC AGCATCGCGG TGGCAAGGGC
ATCATCGGGG CGGATCCCAA GGAGGGCGAT CGGGTTTCGA CAGTTTTCCG GGCGAACACC
CACGACTATC TGTTGGCCTT CACGAACCAC GGCCAGGTCT ACCGATTACG GACCTACGAG
ATCCCGGAAA TGTCCCGGAC TGCGCGCGGG AAATCCGCCG TCAACCTCAT CAACTTCGAC
GACGGCGAAG AGATTACGGC CGTCGTCAGC ATGGACGAGT TCGACGACGA CGAGTGCATC
ACGATGGCGA CCCGCCAGGG ATATGTCAAG CGGACCTGCT GTTCGGAGTT CGAGAACATC
CTCTCGACGG GCATCATCGC CGCGAAACTC GAAGACGGCG ACGAACTGGT CGACGCCGTC
GTCACCGATG GTGAGAGCGA CCTCGTCATC GCCACCGAAG ACGGGATGAC AATCCGGTTT
GACGAGACCG AGGCCCGGCA GATGGGTCGG ACCGCCCGCG GCGTCCGCGG GATCGACCTC
CGGGACGGCG ACAACGTCGC CGGAGTGGTC GCGACCGACG AGCACGACGA GCGGGCACTC
CTGACGGTCA CCGAGCGGGG CTACGGCAAG CGAACGCCAC TCTCGGAATA TCGCACGCAA
TCCCGGTACG GCAAGGGTCT CATCGACATC AAGACCGGTG ATCGCAACGG CGGCGTCACG
GCCGTCAACG CCGTCGCCGA GGACGATCAC GTCATCGTCA TGAGCGCAAC TGGCCAGATC
ATGCGGTGTC CGGTCGAAGA TGTCTCGACG GTCGGCCGCA ACACGATGGG CGTCACGATC
ATGGACGTTG CTGCGGATGA CACCGTCGCG AGCGTCGACG TGATCCCGGG GACGGCGATC
GAGGACTCGT AG
 
Protein sequence
MSSDVPEGPG VTADAARVEH VRIEDEMEQS YIDYAMSVIA GRALPDVRDG LKPVHRRILY 
AMHEMGVSSG SSHRKSSSVV GEVMGDYHPH GDSAIYDTLV RMAQDFSMRY PLVDGQGNFG
SMDGDPAAAM RYTEARMAPI AEELLADIEK DTVDFQANYD DRLEEPEVLP SAFPNLLVNG
SSGIAVGMST NIPPHNLGEV IDATIHLIDN PDAEVTDLME YVKGPDFPTG ANIVGKNAIH
AAYATGRGRL TVRAEYEFEE TDSGRPRIVI TEIPFQENKA RMVERIADDV NEGIIEGVSD
LRDESDRDGV RVVIECKRGA NVDVVENQLL DHHLESTFGV INLALVDGEP RVLTLKETLE
EYVAHRKEVV RRRSEFDLAE AEDRAHILEG RLKALGNVDS VVDLIRDSED RDEAKAALEE
TFDFSTEQAQ HIVRMQLGSL TSMEAAEVED EYEEVEAEIE RLETILNDES ELLDVIKDEL
RAVKDEYDDD RRTSIVEDDG TVTREDLIPE EECLVVVTED DYIKRMPADR FDAQHRGGKG
IIGADPKEGD RVSTVFRANT HDYLLAFTNH GQVYRLRTYE IPEMSRTARG KSAVNLINFD
DGEEITAVVS MDEFDDDECI TMATRQGYVK RTCCSEFENI LSTGIIAAKL EDGDELVDAV
VTDGESDLVI ATEDGMTIRF DETEARQMGR TARGVRGIDL RDGDNVAGVV ATDEHDERAL
LTVTERGYGK RTPLSEYRTQ SRYGKGLIDI KTGDRNGGVT AVNAVAEDDH VIVMSATGQI
MRCPVEDVST VGRNTMGVTI MDVAADDTVA SVDVIPGTAI EDS