Gene Huta_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0129 
Symbol 
ID8382391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp122951 
End bp124063 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content61% 
IMG OID644971187 
ProductDNA topoisomerase VI subunit A 
Protein accessionYP_003129050 
Protein GI257051217 
COG category[L] Replication, recombination and repair 
COG ID[COG1697] DNA topoisomerase VI, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.437456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGG ACACAGGCAA CACGGAAGAC GCAAGCGACG GGGACGCCCG CGAGCGGTTG 
ATCGAGCTGG CGGCACAGTT CTACGACCAG TTCGAGCGCG GCGACGTCCC CCACATGGAC
GTCCCCACGC GGACGAAGAC CAACATCGAG TACGATCCCG AACAGAAGGT CTGGGTCTAC
GGTGATCGGA AGAGTACGCG ATCCTCTAAC AGCGTCAGAG GGGCACAGAA ACTCCTGAAA
GTCATCTATT CGATCGACTT CCTCGCAAAC CAACTCGAAG AAGATCGGTC CTCGACGCTG
CGTGAGTTGT ACTACCTCAG CGAGTCCTGG GACCTCGACG AAGCGCAGTT CAACAGCCAG
GACGAGTCAA ATCAGATCAT CGAGGACTTG GAAATCGTCT CGGACGTGCG CCGCGAGGAG
TTCCACATGC GTCCCGAGGA ATCGGGTGCC AAGGTGATGG GGCCGTTGCG ACTTCGGGAG
CAAACCAACC GCGGCGATCG GGAGATCCAC TGCCAGGACG ACGTGGGCCA GGGCGGCTAT
CAGATCCCGA ACGATCCCGA CACCATCGAG TTCCTTGACA ACGACGCGGA CTTCGTCCTC
TGTGTCGAGA CCGGCGGCAT GCGCGATCGA CTCGTCGAAA ACGGCTTCGA CGACGAGTAC
AACGCCCTCG TCGTCCACCT GGGCGGCCAG CCCGCCCGGG CGACCCGGCG GCTGACCAAG
CGACTCCACG ACGAACTCGA TCTGCCGGTG ACGGTGTTCA CTGACGGCGA CCCGTGGTCC
TACCGGATCT ATGGGTCGGT CGCCTACGGG TCGATCAAGT CCGCCCACCT CTCGAAGTAC
CTCGCGACGC CGGAAGCCCA GTTCATCGGC GTCCAGCCCG AGGACATCGT CGAGTACGAT
CTCCCGACCG ACCCGCTCGC GGATTCGGAC ATCAACGCCC TTGAGTCCGA ACTCGAGGAT
CCCCGCTTCC AGACCGATTA CTGGGAGGAA CAGATCGAAC TCCAGCTCGA CATCGACAAG
AAGTCCGAAC AGCAGGCCCT GGCCTCCTAC GGCCTGGACT TCGTGACTGA TACGTATCTT
CCGGAGCGGC TGGAAGCGAT GGGCATTCTG TAG
 
Protein sequence
MSTDTGNTED ASDGDARERL IELAAQFYDQ FERGDVPHMD VPTRTKTNIE YDPEQKVWVY 
GDRKSTRSSN SVRGAQKLLK VIYSIDFLAN QLEEDRSSTL RELYYLSESW DLDEAQFNSQ
DESNQIIEDL EIVSDVRREE FHMRPEESGA KVMGPLRLRE QTNRGDREIH CQDDVGQGGY
QIPNDPDTIE FLDNDADFVL CVETGGMRDR LVENGFDDEY NALVVHLGGQ PARATRRLTK
RLHDELDLPV TVFTDGDPWS YRIYGSVAYG SIKSAHLSKY LATPEAQFIG VQPEDIVEYD
LPTDPLADSD INALESELED PRFQTDYWEE QIELQLDIDK KSEQQALASY GLDFVTDTYL
PERLEAMGIL