Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0116 |
Symbol | |
ID | 8382378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 111169 |
End bp | 111801 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644971175 |
Product | Protein of unknown function DUF998 |
Protein accession | YP_003129038 |
Protein GI | 257051205 |
COG category | [S] Function unknown |
COG ID | [COG3371] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.163433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAA CACTCACTGA CACCGTGCCG GTTAGGGAAC CCCTGACTGG ACCCCGACGC CTCGCCGGCG GCCTCTTCCT CGCGCTCTCG GCGCAGTTCA TGACCGCGAT CATGCTCGCC GCAGCGATGG CACCGGACTA CGACTTCGGG GCCGGTGCGA TCAGCGACCT CGGGGTCTTC CCCGAGACTG CGCTCCTGTT CAACGGCTCG TTGATACTCG TCGGGATCCT CAACATTGTG GGCGGGGTGT ACTTCTATCG CAGCCACGGC AAGCGCTGGC TCCTTTCGCT GTTCGTACTG GCCGGCGTCG GCGCAATCGG AACGGGGCTC ATCCCGCTGA ACGTCAGCGA CGCCCACAGC CTCTTTGCCC TTGTGGCGTT CCTGTTCTTC AATCTCGAAG CGATCGGCAG CGCAACCCAC CTCACCGGAC CGATGCGAGT CCTCTCGATC GTCACGGGGA CGATCGGTCT CGTCTTCCTG GTCCTCATGG CGGTCGGCGA CGCCGGGACG ACGGCGGCAT TCGGTCCCAT CGGCCACGGC GGCACCGAGC GCATGATCGT CTATCCGGTC ATGATCTGGC TGATCGCCGT CGGTGGCTAT CTGTTGGGTG CGGAAGCAGC AACCGATCAA TGA
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Protein sequence | MTETLTDTVP VREPLTGPRR LAGGLFLALS AQFMTAIMLA AAMAPDYDFG AGAISDLGVF PETALLFNGS LILVGILNIV GGVYFYRSHG KRWLLSLFVL AGVGAIGTGL IPLNVSDAHS LFALVAFLFF NLEAIGSATH LTGPMRVLSI VTGTIGLVFL VLMAVGDAGT TAAFGPIGHG GTERMIVYPV MIWLIAVGGY LLGAEAATDQ
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