| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0069 |
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| Symbol | carB |
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| ID | 8382329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 69742 |
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| End bp | 72963 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644971127 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_003128991 |
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| Protein GI | 257051158 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.503132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCG ACGACCAACC GACGATCCTG TTGATCGGGA GCGGCCCGAT CCAGATCGGC
CAGGCCGCAG AGTTCGACTA CTCCGGCGCA CAGGCGTGTC GCGCGCTCCA GGAGGAAGGC
GCACGCGTCG TCCTGGTCAA CTCGAACCCG GCGACGATCA TGACCGACCC CGAGATGGCC
GACGAGGTCT ATCTCGAACC GATCAATACC GAAGCCATTG CCGAGATCAT CCGCAAGGAG
GAACCCGACG GCGTGATCGC GGGTCTGGGC GGCCAGACCG GGCTCAACGT CACCGCGGAG
CTCGCTGAAG AGGGTGTCCT CGAGGAACAC GACGTCGACG TTATGGGGAC GCCGCTGGAT
ACCATCTACG CGACCGAGGA CCGCGAGCAG TTCCGAAAGC GGATGGAGAA GATCGGCGAG
CCGGTCCCCG CCTCGACGAC GATCAAGAGC ATGGACGAGG TCGAGGCGGC CGTCGAAGAA
GTGGGTGGCC TCCCCGTCAT CATGCGGACA ACCTACACGC TCGGTGGCGC GGGATCGGGC
GTCATCGGCG ACATGGACGA ACTCAAGGAA GCCACACGCA AGGGCCTGCG CCTCTCCCGG
GACGACCGCG TGATGATCAC CGAGTCCATC GACGGTTGGA TCGAACTCGA GTACGAGGTG
ATGCGCGACG CCGATGACTC CTGTATCATC ATCTGCAACA TGGAGAACCT GGATCCGATG
GGGATCCACA CCGGGGAGTC GATGGTCGTC ACTCCCTCTC AGGTCATCCC CGACGAGGGC
CACCAGGAGA TGCGCGACAC GGCGCTGAAG GTGATCCGCG AACTCGAGAT CCACGGCGGC
TGTAACATCC AGTTCGCCTG GCGCGACGAT GGCTCGCCCG GCGGCGAGTA CCGCGTCGTC
GAGGTCAACC CCCGCGTCTC TCGCTCGTCG GCACTTGCGT CAAAAGCGAC GGGCTACCCG
ATCGCCCGCG TGACCGCGAA GGTCGCGATG GGCAAGCGCC TCCACGAGAT CGAAAACGAG
ATCACCGGCG AGACCACCGC GGCCTTCGAA CCGGCCATCG ACTACGTCGT CACGAAGATC
CCGCGGTGGC CGATCGACAA GTTCCGCGAC GTCGACTTCG AACTCGGGCC GGCGATGAAG
TCGACCGGCG AGGCGATGTC GATCGGCCGG ACGTTCGAGG AGAGTCTGTT GAAGGCGCTA
CGCTCGACAG AATACGACCC TGCAGTCAAC TGGACCGAGG TCAGCGACGA CGAACTCGAA
TCGGAGTACC TCGTCCGCCC GTCGCCTGAC CGGCCATACG CGATGTTCGA GGCCTTCGAA
CGCGGCTATT CGGTCGAGAC GGTCTCGGAA CTGACCGAGA TCCGCGAGTG GTACGTCGAA
CGCTACAAAC GGATCGCCGA TGCCGCCGAC GCCGCCAGTG CGGGCGAACT CGATATCGCG
GCCGAGGCCG GATTCACCAA CCACGAAGTC GCGACGCTCG CCAGCGGCGG TGCGTTCGAC
GACACGCACG CCTCCTGGTT GCCAGACCGT CTCCTCGACG AGCGTGGCGT GGTCAGCGAC
GACGGGGAGG CGACGCCACA GACCGACGGC GGCGGCGTCA GTGTCGCGGA CGTCGAAGAC
GCCGCCCCCG CCCGCTCGTT CAAACAGGTC GACACCTGCG CGGGCGAGTT CGAGGCCTCG
ACGCCGTACT ACTACTCGGC TCGCGAACCT CTCTCGGGGC TGGAGCGCAA CGAAGTCCAG
GTCGATCCGG AGATCGAGAG CGTCGTGGTC GTCGGCGGCG GCCCGATCCG GATCGGGCAG
GGCGTCGAGT TCGACTACTG TTCGGTCCAC GCCGTCCGTG CCTTAGAGGA GATCGGTATC
GACGCCCACG TCGTCAACAA CAACCCCGAG ACGGTTTCGA CAGACTACGA CACGTCCGAC
GGCCTGTTCT TCGAGCCGAT CACCGCCGAA GAGGTCGCCG ACGTGGTCGA GGAGACCGGG
GCCGACGGCG TGATGGTCCA GTTCGGCGGT CAGACGTCGG TCGACATCGG CCATCCACTG
GAGGCCGAAC TCGACCGCCG CGGACTCGAC TGTGAGGTCA TGGGGACCTC GGTCGACGCG
ATGGACCTCG CGGAGGATCG CGACCGGTTC AACCGTCTGA TGGACGATCT GGGCATCGCC
CAGGCGGAGG GTGGGACGGC GACCAGCGAA GCCGAGGCGC TCGAACTCGC GCGTGACATC
GGTTACCCGG TGCTCGTCCG GCCGAGCTAC GTGCTCGGTG GGCGGGCCAT GGAAGTCGTC
TACAACGACG ACGACCTCAA GACGTACATC GAGGAGGCCG TCCGGGTGAG TCCGGACAAG
CCGATCCTCG TCGACGACTT CCTCGCGGAC GCCATCGAAC TCGACGTCGA CGCCGTGGCC
GACGGCGACG ATATTCTCAT CGGCGGTGTC ATGGAACACG TCGAGACCGC CGGTGTTCAC
TCAGGTGACT CGGCGTGTAT GATCCCCCCA CGTAGCGACG AGATCGAGAA CGTCATGCCG
CGGATCCGTG AGGTGACCGA ACAGATCGCC GGCGCCTTAG AGACGGTCGG ACTCATGAAC
GTCCAGCTCG CGGTCCGGGA CGGTGAAGTC TACGTCCTCG AAGCGAATCC ACGCTCCTCA
CGGACGGTTC CGTTCGTCTC GAAAGCGACG GGCGTCCCGA TCGCCAAGCT GGCTGCGAAA
GTAATGGCGG GTGCGAATCT CGACGAGCTC GACGTCGCCG AGCAACAGCC CGAGCAGGTC
AGCGTCAAGG AAGTCGTCCT GCCGTTCGAT CGCCTCCCGG GTTCGGACCC GCGTCTCGGC
CCCGAGATGA AGTCCACGGG TGAAGTCATG GGTACGGCCG GGAGCTTCGG GAAGGCCTAC
CAGAAGGCCC AAATGGCGGT CGACAAGCCG ATCCCGCTTT CGGGCACTGC CATCGTCGAT
CTGCCGATCG TCGGCTTCGA GGAACACTTC GAGACGCTTG ATCTCGATGA CTTCGACTCC
CAGGCCGAGC TCGAGGCTGC ACTGCGGGAC GGCGAAATCG ATCTCGTGAT CTCCCGGAAT
CGTGACGTTC TCGAAGTGTG TGTCGAGGAG TCGACTACCT ACTTCTCCAC GATCGCAAGC
GGTAAGGCGG CCCTCGAGGC TATCGAGTCG GACGACCAGC CGCTGTCGGT CCAGGACGTC
GCGACCCGTC CGAAAACGAC TCGGAAGTGG GGCGACAACT GA
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| Protein sequence | MTADDQPTIL LIGSGPIQIG QAAEFDYSGA QACRALQEEG ARVVLVNSNP ATIMTDPEMA
DEVYLEPINT EAIAEIIRKE EPDGVIAGLG GQTGLNVTAE LAEEGVLEEH DVDVMGTPLD
TIYATEDREQ FRKRMEKIGE PVPASTTIKS MDEVEAAVEE VGGLPVIMRT TYTLGGAGSG
VIGDMDELKE ATRKGLRLSR DDRVMITESI DGWIELEYEV MRDADDSCII ICNMENLDPM
GIHTGESMVV TPSQVIPDEG HQEMRDTALK VIRELEIHGG CNIQFAWRDD GSPGGEYRVV
EVNPRVSRSS ALASKATGYP IARVTAKVAM GKRLHEIENE ITGETTAAFE PAIDYVVTKI
PRWPIDKFRD VDFELGPAMK STGEAMSIGR TFEESLLKAL RSTEYDPAVN WTEVSDDELE
SEYLVRPSPD RPYAMFEAFE RGYSVETVSE LTEIREWYVE RYKRIADAAD AASAGELDIA
AEAGFTNHEV ATLASGGAFD DTHASWLPDR LLDERGVVSD DGEATPQTDG GGVSVADVED
AAPARSFKQV DTCAGEFEAS TPYYYSAREP LSGLERNEVQ VDPEIESVVV VGGGPIRIGQ
GVEFDYCSVH AVRALEEIGI DAHVVNNNPE TVSTDYDTSD GLFFEPITAE EVADVVEETG
ADGVMVQFGG QTSVDIGHPL EAELDRRGLD CEVMGTSVDA MDLAEDRDRF NRLMDDLGIA
QAEGGTATSE AEALELARDI GYPVLVRPSY VLGGRAMEVV YNDDDLKTYI EEAVRVSPDK
PILVDDFLAD AIELDVDAVA DGDDILIGGV MEHVETAGVH SGDSACMIPP RSDEIENVMP
RIREVTEQIA GALETVGLMN VQLAVRDGEV YVLEANPRSS RTVPFVSKAT GVPIAKLAAK
VMAGANLDEL DVAEQQPEQV SVKEVVLPFD RLPGSDPRLG PEMKSTGEVM GTAGSFGKAY
QKAQMAVDKP IPLSGTAIVD LPIVGFEEHF ETLDLDDFDS QAELEAALRD GEIDLVISRN
RDVLEVCVEE STTYFSTIAS GKAALEAIES DDQPLSVQDV ATRPKTTRKW GDN
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