Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4755 |
Symbol | |
ID | 8745345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013745 |
Strand | - |
Start bp | 368973 |
End bp | 369647 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646515253 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003406200 |
Protein GI | 284172818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGAAC TGTCCACACT AGTCGAAGGC GGTCAATACT TGATAGAGAA CTTCGACCAG TTCTTGACGC TCCTCCGTCA GCATATCATA TTAGTTTTGG TCTCCGAGTT AGCGGCGATT GCCGTTGCAG TGCCCCTTGG AATCATCGCA GTTCGATACA AACGGTTGCA AGGGGCAATT CTCTCAATGG GTAATGTCGC ACAGACGATT CCGACGCTGG CCGTTATCGC GTTAGCGTTT CCGATCTTCG GACTGGGGTT CAGTTCCGCA GTTATCGCAT TGTTCGTATA CGCGTTATTA CCGATCCTCA CTAACACGAT AACAGGACTC GATCAGGTCG ACGAGAGTAC GATCGAAGCG GCAAAGGGAA TGGGTATGAC GAAAGGTGAG ATATTACGCA AGATCCAGTT GCCAATGGCA CTCTCGGTGA TCTTCGCGGG AATCAGAACG AGTATCGTTA TTAACGTCGG GACCGCGTAT CTGGCGTTTT TCATCGGTGG CGGCGGACTT GGCGTGTGGG TCATCAGCGG TATCAACCTG TTCAACACGC CGCAAATCCT TGCAGGAGCG ATTCCAGGGG CACTTCTTGC GATCACGCTC GATAGCACGT TTGCATTTAT CGCACGCCAA ATCGGCGGAG AAGGTCTTCA GGACCAGTCG ATTGCGACAG GATAA
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Protein sequence | MSELSTLVEG GQYLIENFDQ FLTLLRQHII LVLVSELAAI AVAVPLGIIA VRYKRLQGAI LSMGNVAQTI PTLAVIALAF PIFGLGFSSA VIALFVYALL PILTNTITGL DQVDESTIEA AKGMGMTKGE ILRKIQLPMA LSVIFAGIRT SIVINVGTAY LAFFIGGGGL GVWVISGINL FNTPQILAGA IPGALLAITL DSTFAFIARQ IGGEGLQDQS IATG
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