| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4740 |
|---|
| Symbol | |
|---|
| ID | 8745332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | + |
|---|
| Start bp | 344728 |
|---|
| End bp | 347301 |
|---|
| Gene Length | 2574 bp |
|---|
| Protein Length | 857 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646515240 |
|---|
| Product | glycine cleavage T protein (aminomethyl transferase) |
|---|
| Protein accession | YP_003406187 |
|---|
| Protein GI | 284172805 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.38185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAG ACGACAGCTT GCCGGACCAA GCGGACACTG TTATTGTCGG TGCCGGTATT
GTCGGGTGCA ACCTGGCATA CCAGCTCACT GAACTCGGCC GAGACGACGT CGTCGTCGTC
GATCAGGGAC CGATGCCAAC CACTGGCGGG TCTTCCAGCC ACGCACCGGG GATCATGTTC
CAGACTTCCG AGTCGAAGAT CCTCTCGAAG TTCGCCAAGT ACAGCCGTAA CCTGTACTCG
GACCTGGAAG ACGACGACGG AGTTCAGGCC TACAAGGAAG TCGGCGGCAT CGAGGTCGCG
CGGAGCGACG AGCGGATGGA CTACCTCCAG CGCCGCGTTG AGTGGGCCGA ATCCTGGGGG
CTCCCGAACC CGGAGGTCCT CTCGCCCGAG GAAGTAGAAG AAAAGCTGCC GCTCGTCGAC
ACCGACGTGA TCCAGGGAGG GTACTACTCA CCGACTGACG GCCAGGTGTC TGGCGTCGTC
GCCTGCGCTG CCCTCGCCAG AGAAGCCATG GACCGGGGAG CGAAGTTCGT TCCGCATACC
CGCACCGAAG ACGTCGAGAC CGAGAACGGG TCGGTCAGCT CGGTTATCAC CGAAAATGGG
ACTATCGAGT GTAACGAGGT CGTCATCGCG ACGAACATCT GGGCGCGTCA GCTGGGCGAG
AAACTCGACG TTCACCTCCC GGTGACGCCG GTCGAGCACC AGTACACGAT GACCGAGTCG
CTCGAGGATC TCGCCGACAA CCGGGTCGAC GTCAGCGATC ACCCGCTGTA CGAGAACTAT
AAGGGCGTCT CCGGAGACAA AACCGACCGC CTGCTCGCGA GTCCTGACCG GCCGATCCTC
CGCGATCAGG ACAACGCGAT GTACTTCCGG ACGCACGGGG ACTCCTACGG AATCGGCTCG
TACAACCACG AACCCATTGT ACCTGATCCG CAGGACCTCG GCGGCAACGA GGAAGACGCT
GAACAGGGCT CGGTCCACGA GTTCACCGAG TATCACATGA ACAACGCGAC GCACCCGGAT
CGGCCGGACA AGGCGCCCCG CCAGGCCAGC GACGAACTGC TGCCCGCCAC CGAGGGGAAG
GAACTCGAAC ACAAATACAA CGGGATGTTC GCGGAGTCGC CGAACGGCCT GCCGGTGATG
GGTCCGGTCC AGAAATACGA CGGTCTCTGG ACCGCGGCCG CCATCTGGGT CACTCACGCC
GGCGGCGCCG GCAAGGCGCT CGCCGAGTGG ATGGAAAACG GTATCCCTCG TCTCTCCGAC
GGACCGATCG ACCTCCGGCA CTGCAACGTC AATCGGTTCG ACGCCCACGA AGGCAGCTGG
GACTTCGCGC GAGACATCGG CGGCGAGGAG TACCGCATCG TCTACAACAT CATGCACCCG
AAGTGGGTCT GGACGGATCA TCAGCGCGAC ATCCGCCGCA CGCCGATGTA CCACAGCCAC
AAGGAACTCG ACGCCGAGCT GTGGGCCGAA GCCGGGTGGG AGGAACCGCA GTGGTTCGAG
TCCAACGCCG ACCTGCTCGC CGAGTACGGC GAGCAGATCC CGGACCGCGA GGGCTGGGTG
GGCAAGTACT GGTCGCCCAT CGAGGGCGCG GAGGCGCTCC ACGTCCGCAA CAAGGTCGGC
CTCCACGACA TGACGTCGTT CAATAAGATG GAGGTCGTCG GGAGCGATGC CGGAGACTTC
GTCCAGCGCC TCTGTACGAA CGACATGGAC CTCGACATCG GCGACGTCCG GTACACCTTG
ATGTGTAACG AGGAGGGCGG CGTCCGCGCG GACATCACCG TCACGCGCGT CGACGACAAC
CGCTACCTCC TTCTGACGAC CGGTCGTGAG GTCGGAAACA ACCACGTCGC GTGGGTCCGC
GAGCAGTCCC CCGAGGACGT GGTCGTCAAC GACGTTACCT CCAGCCTAGC GGCGATGGTC
TGTACCGGTC CGAACGCGCG GAAGGTACTC TCCGAGGTGA CGGACGTGGA CCTCTCCGAC
GAGGCGTTCC CGTTCTTCAC GAGTCAGCAG TTCTTCATCA AGAACGTTCC CGTCACCGCG
CTCCGGGTGT CCTACGCCGG CGAACTCGGC TGGGAGCTGT ACACGCCCTC CGAGTACGGC
GAGCAGCTCT GGGAGCACCT CATGGAGGCC GGCGAAGAGT ACGACATTCG CCCGTACGGT
AATGGTGCGC TGAACGCGCT GCGCATCGAG AAGGGCTTCC GGCTGTGGGG CGAGGACCTC
CACACCGAGC ACAACCCCTA CGAGACGGAT CTCGGATGGG CCGTCGACCT GGAGACCGAC
TTCATCGGGA AGGAAGCGGT CGTCGAAGCG GCCGAGGGTA ACAACATCGA CCACAAGGTC
GCGTGCCTGA CCCTCGACGA CGAAGAGGCG ACGATCCTCC CTCACCGTCC GATCTTCGAC
GGTGACGAAC CGATCGGCTA CGTACACAGC GCCGAGTACG GGTACACGGT CGGCGCCTGC
GTCGTCTACA CGTACCTCCC ACCGGAGTAC GCGGAGCCCG GGACCGAACT CGAGATCGAG
TACGAGGGCG AACGGTACGA CGCCACCGTT CGCGAGGAAC CGCTCCTCGA TTAA
|
|---|
| Protein sequence | MNADDSLPDQ ADTVIVGAGI VGCNLAYQLT ELGRDDVVVV DQGPMPTTGG SSSHAPGIMF
QTSESKILSK FAKYSRNLYS DLEDDDGVQA YKEVGGIEVA RSDERMDYLQ RRVEWAESWG
LPNPEVLSPE EVEEKLPLVD TDVIQGGYYS PTDGQVSGVV ACAALAREAM DRGAKFVPHT
RTEDVETENG SVSSVITENG TIECNEVVIA TNIWARQLGE KLDVHLPVTP VEHQYTMTES
LEDLADNRVD VSDHPLYENY KGVSGDKTDR LLASPDRPIL RDQDNAMYFR THGDSYGIGS
YNHEPIVPDP QDLGGNEEDA EQGSVHEFTE YHMNNATHPD RPDKAPRQAS DELLPATEGK
ELEHKYNGMF AESPNGLPVM GPVQKYDGLW TAAAIWVTHA GGAGKALAEW MENGIPRLSD
GPIDLRHCNV NRFDAHEGSW DFARDIGGEE YRIVYNIMHP KWVWTDHQRD IRRTPMYHSH
KELDAELWAE AGWEEPQWFE SNADLLAEYG EQIPDREGWV GKYWSPIEGA EALHVRNKVG
LHDMTSFNKM EVVGSDAGDF VQRLCTNDMD LDIGDVRYTL MCNEEGGVRA DITVTRVDDN
RYLLLTTGRE VGNNHVAWVR EQSPEDVVVN DVTSSLAAMV CTGPNARKVL SEVTDVDLSD
EAFPFFTSQQ FFIKNVPVTA LRVSYAGELG WELYTPSEYG EQLWEHLMEA GEEYDIRPYG
NGALNALRIE KGFRLWGEDL HTEHNPYETD LGWAVDLETD FIGKEAVVEA AEGNNIDHKV
ACLTLDDEEA TILPHRPIFD GDEPIGYVHS AEYGYTVGAC VVYTYLPPEY AEPGTELEIE
YEGERYDATV REEPLLD
|
|---|
| |