Gene Htur_4640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4640 
Symbol 
ID8745244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013745 
Strand
Start bp220340 
End bp221524 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content59% 
IMG OID646515152 
ProductCystathionine gamma-lyase 
Protein accessionYP_003406099 
Protein GI284172717 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGAC ACAATAGCCA GTTCGACAGG AATCGATTCG CAACCATCGC AGTCGGCGCA 
GCTGAAACCG AAACGCATCC TCACAGGGAT GGAACGAACG ATGTCGTCCC GCCGATCCAC
CTTTCGACTA CGTTCGAGTG GGCCAGCGGG GAGGACGCCA ATGACCACGA TTATTCGCGC
GAGAGCAATC CGACGCGGGC AGCCCTCGAA GAGCAGTTAG CCCGCCTCGA AGGCGGCGAG
CATGGGTTGG CGTTCGCCTC CGGAATGGCC GCTACATCGA CGACGATGCT GTCGCTGGTC
CCCCCGGGAG GCCACGTCGT CTCCTCGGAC TCCATCTATA GCGGGACCGA AAAACTGCTC
ACGGAACGCA TGGCCGGACA TCTCGGTGTT GACATCGACT TTGTTGACGC CCGTGACCCC
GACAACGTCG CCGATGCAGT CAACGCGGAC ACTGACTTGA TCTGGGCAGA AACACCGTCG
AACCCCTTGA TGAGGTTGTG CGATATCCAA ACGATAGCCG ACATCGCTGA TGACCATGCT
GCTCTGTTCA GCGTGGACAG TACCTTTGCG AGTCCGTACT GCCAAGCCCC ACTCGAACTG
GGTGCTGACA TTGTCATTCA CAGCACCACC AAGTATCTCA ACGGGCACTC CGACTCGATC
GGCGGTGCCG TTATCACCGA CGACAGTGAC GTTTTCGAGC AATTAGCGTT CGCGCAGCGG
GTCGGGCTTG GGAATATGCT TTCGCCGTTC GACTGCTACC TCGTTACGCG AGGCATCAAG
ACGCTGCCCG CGCGGATGGA ACATCACGAG CAGAACGCGA TGGCAGTTGC CCGGTTCCTC
GAAAGCCACG ATCGGGTCGC TCGTGTCCAC TATCCAGGTC TCGAGAGCCA CCCGCAACAC
GATCTTGCGA GTGAACAGAT GTCGGGGTAC AGCGGGATGC TGTCCTTCGA GTTTGATGGC
GCACTCCTCG AACTTGAGGC GTTCATCGAG GGGCTTGAGG TATTCACGCC GGGAGCTAGT
CTCGGTGGGG TCGAGAGCCT TGTTGAGGTA CCGTCACTAA TGATCCCCGA CGAGTTCAGT
CGCAGTGAGG AGTCAGCGGA GATTCCCGAG ACGTTGGTCC GGGTATCCGT TGGTCTCGAA
GACGCCGATG ACCTCTGCGA GGATCTCCGG ACGGCGCTAC CGTAG
 
Protein sequence
MTRHNSQFDR NRFATIAVGA AETETHPHRD GTNDVVPPIH LSTTFEWASG EDANDHDYSR 
ESNPTRAALE EQLARLEGGE HGLAFASGMA ATSTTMLSLV PPGGHVVSSD SIYSGTEKLL
TERMAGHLGV DIDFVDARDP DNVADAVNAD TDLIWAETPS NPLMRLCDIQ TIADIADDHA
ALFSVDSTFA SPYCQAPLEL GADIVIHSTT KYLNGHSDSI GGAVITDDSD VFEQLAFAQR
VGLGNMLSPF DCYLVTRGIK TLPARMEHHE QNAMAVARFL ESHDRVARVH YPGLESHPQH
DLASEQMSGY SGMLSFEFDG ALLELEAFIE GLEVFTPGAS LGGVESLVEV PSLMIPDEFS
RSEESAEIPE TLVRVSVGLE DADDLCEDLR TALP