Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4500 |
Symbol | |
ID | 8745129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013745 |
Strand | - |
Start bp | 100920 |
End bp | 101852 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646515037 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003405984 |
Protein GI | 284172602 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.252807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAT CAACATCCGA CACCGCCCTC GATGTCGCAT CGGTCGTCGA AGACGTCAAC CTCAGACGGA TCGGCCACTA CACGATAATC ATCCTCTTCC TCGGGTTCTT TCTCCTCCCA CTGATAACGG GGATCATGAC GGCGCTAAAA ACGAGCAACG CCGTCGCCAA CACGCTCCCG TTCATGCCGC CGCTGGGTGA CGGCTTCACG CTGGCCAACC TCGAGTACGC GTTCGGCCGA CTCTCGCACG CGTTCGTCAA CTCGTTGCTG ATGGCGATTC CGGCGACGAT CATCAACGTG TTGCTCGCGA GTATGGCGGC GTTCGGGCTC ACGATGGTCC GATGGCGCGG CCAGCTGGGG ATTCTGGTCC TGTTCCTGAT CGGGATCTTC GTCCCGTACC AGGCCGTGCT GGTGCCGCTG GCGCGGTTCT GGAACAACAT CTTCCCGATC GCGGACATGC TGGAGCCGCT GTTTTCCATC GTGCCGCTGA TCCAGGGCTA CCACTCGGCT CTCGTGCCGC TGATCGTCAC ACACGTCGCC TACGGGATCC CGATCTGTAT GCTCCTGTTC CGATCGTATT ACCAGAGCCT CCCGAACTCG CTGGTCGAGG CGGCCAAAAT CGACGGTGCG AGCATCACCA AGATCTATCG ACGCATCATT CTGCCGATCT CGAAACCGAT GTTCGGCGTC GTCTTCATCT ACCAGTTCAC CCAGATTTAC AACGAGTTCC TGTTCTCGTT TACCCTGGTT ACGAGCGCGA ATTCGTCAGA AGCGCCGATC ACGCTGATCA TTCCGACGGT CGGGGCGTCG ACGTCCGGAA TCGACTTCGG AATTCGGATG GCGGCGGCGT TCCTCGCGGC ACTGCCGACG ATCATCCTGT ACGTCGCGTT CGCCGAGCAG TTCGCCAAAG GACTGGAAAC GGAGAGTGCA TAA
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Protein sequence | MSQSTSDTAL DVASVVEDVN LRRIGHYTII ILFLGFFLLP LITGIMTALK TSNAVANTLP FMPPLGDGFT LANLEYAFGR LSHAFVNSLL MAIPATIINV LLASMAAFGL TMVRWRGQLG ILVLFLIGIF VPYQAVLVPL ARFWNNIFPI ADMLEPLFSI VPLIQGYHSA LVPLIVTHVA YGIPICMLLF RSYYQSLPNS LVEAAKIDGA SITKIYRRII LPISKPMFGV VFIYQFTQIY NEFLFSFTLV TSANSSEAPI TLIIPTVGAS TSGIDFGIRM AAAFLAALPT IILYVAFAEQ FAKGLETESA
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