Gene Htur_4463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4463 
Symbol 
ID8745092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013745 
Strand
Start bp51000 
End bp52052 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content63% 
IMG OID646515000 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003405947 
Protein GI284172565 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0308454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGAA AACGCACGAA GACCGTCGAG GATCCGATCT TCGAGGTTCG GGACACGACC 
GTCTCGTTCG ACATGGATCG GGGGGAATCG AAAGTACTGA ACGAGGTAGA CATCGACGTA
GAACGAGGCG AAGTCCTCGG CGTCGTCGGT GAAAGCGGAA GCGGGAAATC GATGTTCGCC
TCCGCGCTGC TCAATGCGGT CGTCGATCCC GGACAGCTCA CCGGCGATAT CACCTTCTAC
CCCGAACCGG AGAAGCCCGT CGACCTGCTC AGTCTCTCCC AAAGCGAGAT CAAGCAGGTT
CGCTGGGAGG AGATCTCGAT GGTGTTCCAG GGCGCGATGA GTTCGTTCAA CCCGACGATG
TCGATCCGGG ACCACTTCCG TGAGACGCTG GCCGTCCACG ACTACGATGT CGAGGAGGGG
ATGGAGCGCG CCGAAGACCT CCTCTCGGAT CTCTACCTCG AGTCGGATCA GGTGTTAGAC
TCCTATCCGC ACGAACTGTC GGGCGGAATG AGCCAGCGCG CACTCATCGC GTTGAGCCTG
GTGCTCAAGC CGGAGGTGCT GGTGATGGAC GAGCCGACGG CCGCGCTGGA CCTCCTGATG
CAGCGCAGTA TCATCCGGTT GATCAGGCAG ATCGCGGACG AGCGCGACCT GACGATCGTC
TTCATCACCC ACGACCTGCC GCTGGTCGCG AACCTCGCCG ATCGGATCGC GGTTCTCTAC
GCCTTCGAGT TCGTCGAGGT CGGCCCCGCG TACGAGGTGC TGACGGAAGC GAAACACCCC
TACACGCGGG CGCTGCTCAA CTCGACGCCG AACCTGGAGA CGCCCCGCGA GCAGATGCGA
CCGATCGAGG GCGCGGCCCC GGATCCGGTG TCGGTACCGA ACGGGTGTTC GTACCATCCG
CGCTGTCCAC TGGCCGACGC GACCTGCGAA CGCGACGATC CACCCCTCGA GTCGGACACC
CCGGAGGACG GCCACGTTGC AGCATGTCAC TACGTCGATA CGGTACCAGA GACGGTTCCG
CTGACCCTTC AGGAGGTGAA GGTCAATGAG TGA
 
Protein sequence
MQRKRTKTVE DPIFEVRDTT VSFDMDRGES KVLNEVDIDV ERGEVLGVVG ESGSGKSMFA 
SALLNAVVDP GQLTGDITFY PEPEKPVDLL SLSQSEIKQV RWEEISMVFQ GAMSSFNPTM
SIRDHFRETL AVHDYDVEEG MERAEDLLSD LYLESDQVLD SYPHELSGGM SQRALIALSL
VLKPEVLVMD EPTAALDLLM QRSIIRLIRQ IADERDLTIV FITHDLPLVA NLADRIAVLY
AFEFVEVGPA YEVLTEAKHP YTRALLNSTP NLETPREQMR PIEGAAPDPV SVPNGCSYHP
RCPLADATCE RDDPPLESDT PEDGHVAACH YVDTVPETVP LTLQEVKVNE