| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4459 |
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| Symbol | |
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| ID | 8745088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | + |
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| Start bp | 45183 |
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| End bp | 46883 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646514996 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
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| Protein accession | YP_003405943 |
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| Protein GI | 284172561 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.325037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGA CCGACTCCGA GGGCGGCCCG CCGACCGCGG CCGGAAGCGA ACAGCTCTAC
GACGCGCTGG TCGACGCCGG GATCGACCTC CTCGTCGGAC TTCCCGGAAC GCAGACGCTG
CCGCTGGATC GAACCGTCGA CCGGCGGGAC GACATCCGGT ACGTGATGGC CCGCCACGAG
ACCGCGATCC CTCACATCGC CTGGGGGCAC TATGAGGCCG GCGGCGACGT CGCCGCGACG
CTGACCGTTC CCGGCCCCGG CGATACGAAC GCGATGCACG GGCTGAAGAA CGCGCTCGAC
GACCGCGTTC CCCTGGTCCA CATCGCCGCG GACGCCGATC CCGAGGACCG CGGGAAGGGA
CCGATCCACG AGATCGAACC CGACACCTAC GACAACGTGG TCAAGGAGAA CTACTCGATC
GAGCGCCCGG TCGAGTTCCA CCGAGCGATC CGGTCGGGAA TCGAAACCGC GCTGACGCCG
CCGTGCGGCC CGGTCCGACT CGGCGTCCCG AAGCCGCTCC TCGACGCCGA GTTCTGCTCG
CCGCCGGTGA CGGTCGATCC GCCGACGAGC CGGTTTGACG GTGACGCGGA GTACGAGACC
GCGCGGCAAC TACTCGCCGA CGCCGAACGA CCGGTCGTCT ACCTCGGCGT CGGCGCCCGT
CGGACGGGTG ATCCGGACGC CGTTCGGGCC CTCGTCGAGA CGCTCGACGC TGCCGTCGTC
GCCTCCTACA AGGGCAAGGG CGTCTTCCCC GAGGGCGATC CGCGCTGGCT CGGCGTGACG
GCCAGTCACC TCCCAGCGGG AGCGGAACGC GCGCTCGAGG CCGCCGACGT CGTACTCGCG
CTCGGCACTC GGTTCGACGG TGTAGTGACC GCCGACTGGT CGCTTCCCAT GGGCGACGCA
CTCGTCCACG TGACCCTCGA CTCGAGTCGG ATCGACGTCG CCTACGACTC GGACGTGGCG
ATCGTCGACG ACGTCGGCAG CGCGGTCGAT CGGCTCCGAG ACGGCCTGGG GTCCAGAGAG
CGACCCGACG GCGCGTGGGA CGGGGCCGCC GTCGGTCGAC GCGTCCGCGC GGAGTACGAC
GACCGGCTCG AGGACCGCGG CCTGCTCGAG GACGACGCGC CGATCGCGAC GGCCGGCGCG
CTTCGGACCC TTCGCAAAGC GCTGCCACGC GAAACCGTCG TGACGACGGA CATCGGCGGG
TTCCGGCTCT GGGCCAAGCA GACCTTCGAG ACGGAGGAGC CGGAAGCCTA CGTCACGTCC
GGCTCCTGGG CGGGAATGGG CGTCGGTATC CCGGCCGCGA TCGGCGCGAA ACTCGCCAGG
CCGGAGCGGC CGGTCGTCGC GCTGACGGGC GACGGCGGGG CCATGATGTG CCTGCAGGAA
CTGCACACGG CCGCGGCGTA CGACTTGGAC GTGCTCACGA TTCTCTTCAA CAACGAGGAC
TACGGGATCA TCAGCAAGTC ACCCGCCATC GACCAGTACG CCGAGGGCCA CCGATTCGAC
TGGTCCTCGC CCGATTTCGC CGCGATCGCC GAGGGGTTCG GCTGTCGTGG ACAGACGGTA
CAGACGCTCT CGGGGCTCGA GGACGCCGTC GAGGCCGCGC TCGCGCGGGC TGACGGACCG
GAGCTGATCG ACGTTCGCGT CGACCCGGAC GAGCCGACGG CCGCGTCGTT CGCCGACTAC
GACTCCGAAC TCGAGTTCTG A
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| Protein sequence | MNPTDSEGGP PTAAGSEQLY DALVDAGIDL LVGLPGTQTL PLDRTVDRRD DIRYVMARHE
TAIPHIAWGH YEAGGDVAAT LTVPGPGDTN AMHGLKNALD DRVPLVHIAA DADPEDRGKG
PIHEIEPDTY DNVVKENYSI ERPVEFHRAI RSGIETALTP PCGPVRLGVP KPLLDAEFCS
PPVTVDPPTS RFDGDAEYET ARQLLADAER PVVYLGVGAR RTGDPDAVRA LVETLDAAVV
ASYKGKGVFP EGDPRWLGVT ASHLPAGAER ALEAADVVLA LGTRFDGVVT ADWSLPMGDA
LVHVTLDSSR IDVAYDSDVA IVDDVGSAVD RLRDGLGSRE RPDGAWDGAA VGRRVRAEYD
DRLEDRGLLE DDAPIATAGA LRTLRKALPR ETVVTTDIGG FRLWAKQTFE TEEPEAYVTS
GSWAGMGVGI PAAIGAKLAR PERPVVALTG DGGAMMCLQE LHTAAAYDLD VLTILFNNED
YGIISKSPAI DQYAEGHRFD WSSPDFAAIA EGFGCRGQTV QTLSGLEDAV EAALARADGP
ELIDVRVDPD EPTAASFADY DSELEF
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