| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4149 |
|---|
| Symbol | |
|---|
| ID | 8744777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 417340 |
|---|
| End bp | 418275 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646514698 |
|---|
| Product | lipoic acid synthetase |
|---|
| Protein accession | YP_003405645 |
|---|
| Protein GI | 284167367 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTA CTGGCAAGCC CGAGTGGCTA AAGATGCGGC CGCCGTCGGG CGAGCGGTTC
ACCGACATCA AAGAGACGCT CCGGGAGCGA GACCTCAACA CGGTCTGTGA GGAAGCCAAT
TGTCCGAACC TCGGCGACTG CTGGTCGGGG CGCAACGGCC CCGGCACGGC GACGTTCATG
CTGATGGGTG AGCGCTGTTC GCGGGGGTGT AACTTCTGTG ACGTCGAGAC CGGCGGCATG
GAGCCCCTCG ACCCGAAGGA ACCCCAGCAG GTCGCCGCGG CCGTCGCAGA CATCGGCCTG
GACTACGTCG TCTTGACCAG CGTCGACCGG GACGACTTGC CCGATCAGGG CGCGGGCCAT
TTCGCCGAAA CCATCCGCGA AATCAAAGAC CGGGACCCGG GCATCCTCGT CGAGGTGCTC
ATTCCCGATT TCCAGGGCGA GGAACGCCTC GTCCGGAAGA TTATCGACGC GGATCCGGAC
GTTATCGCGC ACAACGTCGA GACCGTCCAG CGGTTACAAC GGCCAGTCCG GGACCGGCGA
GCGAGCTACG AGCAATCGCT GTCGGTGCTC CGGCAGGTCC ACCGCGAATC CGACATCTAC
ACGAAATCCT CGCTCATGCT CGGGGTCGGC GAATACGCCC ACGAAGTCTA CCGGACGCTC
GCGGACTTGC GGGCAGCGGG CGTCGACGTG GTGACGCTGG GCCAGTACCT CCGGCCCTCC
CTGTCGCACT TGGAAGTCGA CGAGTACGTC CACCCCGACG CCTTCGACAC GTGGCAACGC
GTCGCCGAGG AGGAATTGGG CTTTCTGTAC TGCGCGTCGG GCCCGATGGT CCGCTCCTCG
TATCGAGCGG GGGAGCTGTT CGTCGATGCC CTCCTTCAGG ACGGCAAATC CGTCGCCCAG
GCCCGCCGCG AAGCGCGGGC GAAAGCGGAC CAGTGA
|
|---|
| Protein sequence | MSRTGKPEWL KMRPPSGERF TDIKETLRER DLNTVCEEAN CPNLGDCWSG RNGPGTATFM
LMGERCSRGC NFCDVETGGM EPLDPKEPQQ VAAAVADIGL DYVVLTSVDR DDLPDQGAGH
FAETIREIKD RDPGILVEVL IPDFQGEERL VRKIIDADPD VIAHNVETVQ RLQRPVRDRR
ASYEQSLSVL RQVHRESDIY TKSSLMLGVG EYAHEVYRTL ADLRAAGVDV VTLGQYLRPS
LSHLEVDEYV HPDAFDTWQR VAEEELGFLY CASGPMVRSS YRAGELFVDA LLQDGKSVAQ
ARREARAKAD Q
|
|---|
| |