| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4104 |
|---|
| Symbol | |
|---|
| ID | 8744732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 367307 |
|---|
| End bp | 368998 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646514661 |
|---|
| Product | histidine ammonia-lyase |
|---|
| Protein accession | YP_003405608 |
|---|
| Protein GI | 284167330 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTCG AACTCGACGG TGAGAGCCTC ACGCCCGACG CCGTCGTCGC AGTCGCTCGC
GACGATGAAC CGATCAGCGT ACCGGAATCG GCTCGCGAGC GGGTTCGCGA GTGCCGTGCC
CGCGTCGAGG ATATCGTGGA GAGTGGCAAC GTCGTGTACG GCCTCAACAC CGGTTTCGGC
CAGTTAGTCG ATGAACGGAT CCCGTCCGAA GACTTGGCGC AGTTACAGGT CAACCTCCTC
CGCAGCCACG CCGCCGGCAC GGGGCGCGAA CTCACGCGCG AGGAAGTCCG GGCCATGCTG
GTCGCTCGAA TCAATGCCCT CGTCAAGGGC TACTCGGGGG TTCGCGAGCG CGTCATCGAC
TATCTCGTGG CGATGTGTAA CGCGGGCGTC CACCCTGTCG TCAGAGCCCA GGGTAGCCTT
GGCGCCAGCG GCGATCTCGC TCCACTGGCG CATATGTCGT TGGTATTGAT CGGCGAGGGC
GAAGCGGTCG TCGACGTCGC TATCGATGAG CGAGACGAGC GCGACGAGGC CGACGAGGCC
GGCGGCACCG ATGGTGCCGA CACGGAAGCC GGGGCGACTC GCCGGCTGTC CGGGCAAAAC
GCCCTCGCGA CTATCGATCG CGAGCCGCTC GATCTCGCCC CGAAGGAGGG ACTCGCACTC
ATCAACGGCA CGCAGTTGAC GGCGGCGCTC GCGGCTCTGG TCGTCGTCGA CGGGGAGCAC
CTCGTCCGCG CCGCCGACGC AGCCGGCGCG CTGACGACTG AGACGACGCT CGCAACGACG
GCGACCTCGG CCCCGGCTAT CCAGAGCGTC CGGCCCCACA CGGGCCAGCA GGAAAGCGCG
GACTTGGTCC GCCGGCTCAC CGCCGACAGT GAGATCGTCG AGGCCCACCG AAACTGCGAT
CGAGTGCAGG ATGCCTACTC GCTGCGGTGT CTGCCACAGG TCCATGGCGC CGTCCGGGAC
GCGGTGTGCC ACCTCCGCGA GGGCGTCACG ACCGAACTCA ACAGTGCGAC GGACAACCCG
TTGATCTTCC CGGCGGCCGA GGTCGACGAC CGCGCTTCCG GAACCGATCG CGGCGCGGCC
CTTTCGGGCG GTAACTTCCA CGGCGCCCCG TTGGCTCTCC GCCTCGAGTA CGTCCGCCTC
GCGCTGACCG ACCTCGCGGC GATCTCCGAG CGGCGGATCG ATCGGCTCCT CAATCCGAAC
CTTCAGGAGG ACCACCTCCC ACCGTTTCTC GCGGTCGAGA GCGGCCTCGA ATCGGGCTAC
ATGATCGCTC AGTACAGCGC CGCCGCCTTG GTCAACGAGT TGCGCTCGCT CGGTGCCGCC
TCGGCGGACA ACACCCCCGT TAGCGGCAAC CAGGAGGATC ATGTCAGTAT GAGCGCCCAA
GCCGCGCTGA ACGCCCGAAC TGCAATCGAG AACGCGAGAG GTGTCGTCGC TGCCGAACTC
GTCTGTGGAA CCGAAGCCAC CGAGTACGTC GACGACGCGT TCGAGGCCAC CGACCTTTCG
CTCGGCGTCG GAACACGCGC AGTTCGCGAC CTGATCCGCG AGGTCGTTCC GCCGCTCACC
GGCGACCGAC CACTCCATCC GGATATCGAC GCCGTTGCGG ACCTGCTCGC CGCGGGCCAC
CTCGACACCG CCCTCGAGCA GGCGCTTGAG ACGTTCGACC CGGCCAGTGG GCGCTCACGG
GTCGGAGAGT AG
|
|---|
| Protein sequence | MTVELDGESL TPDAVVAVAR DDEPISVPES ARERVRECRA RVEDIVESGN VVYGLNTGFG
QLVDERIPSE DLAQLQVNLL RSHAAGTGRE LTREEVRAML VARINALVKG YSGVRERVID
YLVAMCNAGV HPVVRAQGSL GASGDLAPLA HMSLVLIGEG EAVVDVAIDE RDERDEADEA
GGTDGADTEA GATRRLSGQN ALATIDREPL DLAPKEGLAL INGTQLTAAL AALVVVDGEH
LVRAADAAGA LTTETTLATT ATSAPAIQSV RPHTGQQESA DLVRRLTADS EIVEAHRNCD
RVQDAYSLRC LPQVHGAVRD AVCHLREGVT TELNSATDNP LIFPAAEVDD RASGTDRGAA
LSGGNFHGAP LALRLEYVRL ALTDLAAISE RRIDRLLNPN LQEDHLPPFL AVESGLESGY
MIAQYSAAAL VNELRSLGAA SADNTPVSGN QEDHVSMSAQ AALNARTAIE NARGVVAAEL
VCGTEATEYV DDAFEATDLS LGVGTRAVRD LIREVVPPLT GDRPLHPDID AVADLLAAGH
LDTALEQALE TFDPASGRSR VGE
|
|---|
| |