Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3885 |
Symbol | |
ID | 8744513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 117210 |
End bp | 118205 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646514469 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003405416 |
Protein GI | 284167138 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.426528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG AACGACCCGA CGACGAACTC GAGACGCTGT TCGACGCGGA CATCGACCGA GAGCCGACGC CGCGGTCCCA GCGGCTCAAG CGACAGTTCG ACCTGTACGT CGTCGCCCCC GCCCGGGTGG CGATGACCGA CTGGCGAGCC GTCGTCGGGA CGGCGATCAT CACGATATTC TTCCTGATGG GAACTGTCGG CGTCTGGCTC GTCGACAGAC CGACGAGCGG GGATGCGCCC GTTCTCGAAC CGCCGTTCCA GAACCCCAAC TACATTCTCG GGACGGACAC CTTCGGGCAG CCGATCGGGG CGCAACTCAT CCACGCGACG CCGGACATGT TCCGAATGGT GTTCGCCGGA GCGGTCGTGA GCGTCGGGTT CGCGGCGCTG GTCGGCATCC TTTCGGGGTT CCTCCGTGGC TCGAAGATCG ACACGATACT GATGTCGATC ACCGACATCA TCATCACCAT CCCCGGACTC CCGCTGGTCA TCGTCCTCAT CGCGATCTTC CAGCCCAGAG ACCCGTACGT CATCGGCGTC TTGCTCGGGC TCGACAACTG GCCCGGGCTG GCGAGGACCG TACGCTCACA GGTGCTCAGC ATCCGGGAGG AGTCGTACGT GGAGGCCTCG CAGATCATGG GCGTCTCGAC GGGGACGATC CTCCGCCGGG ACGTCCTCGC CCAGCTGATG CCGTACATCA CGGTGAACTC GGCGCTGGCC TCTCGACGCA TCATCTTTGA GTCCGTCGGG CTGTACTTCC TCGGGATCCT CCCGTTCACG ACGTTCAACT GGGGCGTCAT GATGAACATC GCCTACGAGG GGCAAGCGCT GAGTCGGCCG GACATGTACC ACTTCCTCGC GTTCCCGTTA CTGACGATCT TCCTGATGTC GTTCGGACTC GTGTTGTTCT CCCAGGGGAT GGACAGCGTG TTCAACGTCC GACTCAGGGC GCGTCACTCG TCGACGATCG ACGACGACGG AGGTCCCGAA CCATGA
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Protein sequence | MSNERPDDEL ETLFDADIDR EPTPRSQRLK RQFDLYVVAP ARVAMTDWRA VVGTAIITIF FLMGTVGVWL VDRPTSGDAP VLEPPFQNPN YILGTDTFGQ PIGAQLIHAT PDMFRMVFAG AVVSVGFAAL VGILSGFLRG SKIDTILMSI TDIIITIPGL PLVIVLIAIF QPRDPYVIGV LLGLDNWPGL ARTVRSQVLS IREESYVEAS QIMGVSTGTI LRRDVLAQLM PYITVNSALA SRRIIFESVG LYFLGILPFT TFNWGVMMNI AYEGQALSRP DMYHFLAFPL LTIFLMSFGL VLFSQGMDSV FNVRLRARHS STIDDDGGPE P
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