Gene Htur_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3873 
Symbol 
ID8744501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand- 
Start bp103403 
End bp104434 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content65% 
IMG OID646514457 
Productputative F420-dependent oxidoreductase 
Protein accessionYP_003405404 
Protein GI284167126 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0154742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG TCACCTTCGA GTATAACGTG CCGGTGTTCG CGGGCGCGCC GGAGTCGGGA 
ACGGATCCCT CCCACCGCGA CACGCCGTGC TACGAGGAAC TCGACTGGGA GACCACGAAG 
CAGGGCGTCC TGAAAGCCGA GGAGCTCGGC TTCGACGCCG CCTGGGCGCC CGACCACCTC 
ATGCTGGGTC GCGACAACGC CGAGTACGAG TGCTGGACGC TGCTGTCCGC GCTGGCGGGG 
CTCACCGACG ACATCAACCT CGGCTCGCTC GTCCTCTGTA ACGACTACCG CAACCCCGCG 
CTCGTCGCGA AGATGGCCGC GACGCTCGAT ATCGTCTCCG GCGGTCGCCT CGAGCTCGGG 
CTCGGCGCCG GCTGGCACGA ACCCGAGTAC GAAGCCTACG GCTGGGAGTA CCGCGACGGC 
TTCGAGCGAC TGATGCGCTT AGACGAGAGC ATCCGCCTGA TGAAGGAGAT GTGGACCGAC 
GAGTCGGGCG ACGGCGCCTC CTTCGCGGGT GATCACTACG AGATCGACGG CGCCTACTGT 
GAGCCCGGTC CGGTACAGGA CCCGCATCCA CCGATCCTCG TCGGCGGCCA GGGCGAGGAG 
GTGACGTTGA AACTCGTCGC GAAACACGCC GACGTCTGGA ACACGGACGT GTTCAAAGGG 
ACGCCGGAGA CCTTGGAACA CAAGATCGGC GTCATCGAGG ACCACTGCGA GACGGTCGGC 
CGCGATCCCG ACGAGATCGA GTACTCCTGG GACGGGCACG TCATCTGTAC GCGCGATCCC 
GAGAAGTACG AGCGCCTGCT CGACCTGATG ATTCCGATCC AGTTCGAGGA GGAGTACGTC 
GATCAGGCCG ACATCACGAC CGAGGAGATC GCCAGGGACT ACTTCATCAT GGGGACGCCC 
GAGGAGTGCG CCGAGGCGAT CGAGCGGCGA ATCGACGTCG GCGTCACGAA GTTCCAGTGC 
TGGTTCGTCG ACTTCCCCGA TACCGGCGGC ATGGAACTGT TCGCCGACGA AGTGATACCG 
CAGTTTCGGT AG
 
Protein sequence
MSDVTFEYNV PVFAGAPESG TDPSHRDTPC YEELDWETTK QGVLKAEELG FDAAWAPDHL 
MLGRDNAEYE CWTLLSALAG LTDDINLGSL VLCNDYRNPA LVAKMAATLD IVSGGRLELG 
LGAGWHEPEY EAYGWEYRDG FERLMRLDES IRLMKEMWTD ESGDGASFAG DHYEIDGAYC 
EPGPVQDPHP PILVGGQGEE VTLKLVAKHA DVWNTDVFKG TPETLEHKIG VIEDHCETVG 
RDPDEIEYSW DGHVICTRDP EKYERLLDLM IPIQFEEEYV DQADITTEEI ARDYFIMGTP 
EECAEAIERR IDVGVTKFQC WFVDFPDTGG MELFADEVIP QFR