| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3854 |
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| Symbol | |
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| ID | 8744482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 80279 |
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| End bp | 81097 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646514439 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003405386 |
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| Protein GI | 284167108 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0942862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCAGT ACGATTTCGA CGATCAGGTC GCATTCGTCA CCGGCGCTGC ACACGGGCAG
GGTCGATCGC ACGCCCAACA CTACGCCAAA CACGGTGCGG ACGTGGTCGT TACCGACATC
GACGACGGGA TGGACTCGGT GCCGTACGAG CTCGGCACGG AGGACGAACT CGAGGAGACG
GCGAGTCTCG TCGAGGACGA AGGCCAGGAC GCGCTCGCGG TCGAAATGGA CGTTCGCGAC
GAAGACGAAG TCGAAGCGGC GGTCGACGAG GCCCTCGACG AGTTCGGGAA GATCGACGTC
CTCGCGAACA ACGCGGGGAT CGGAACCTTC GGCGATCTGG TCGAGATGGA CGAGACGATG
TGGGACGAGA TGATCGATAC CAACCTCAAA GGCGTCTGGT TGTGCTCGAA GCACGTCGGA
AAACACTTCG TCGACCGCGG CGACGGCGGC AAAATCGTCT CGACATCGTC GATCTACGGG
AAGGTAGCCG GTCCCGGATC CGGCCACTAC ATCGCCGCTA AGCACGGCGT CCTCGGGCTG
ACGAAGACGT TAGCGCTCGA ACTCGCGGAG TACGACGTCA ACGTCAACGC CGTCTGTCCG
ACCGGCGTCG ACACGCCGAT GATCAGCGGC GTGCTCGAGG CCTACGGCGA AGACGTCCTC
GACGACGTGA TCAGTGTCAC TGGCCCGTGG AACCTCTTCG AGGAGGGAAT GATCGAGTCA
CGGGACATCA GCGAGGCCTA TATGTGGCTC TCGAGCGACG CGGCCCGCTA CGTCACCGGC
ATCGCGCTGC CGGTCGACGC GGGAATGCTC GCAAAGTAA
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| Protein sequence | MVQYDFDDQV AFVTGAAHGQ GRSHAQHYAK HGADVVVTDI DDGMDSVPYE LGTEDELEET
ASLVEDEGQD ALAVEMDVRD EDEVEAAVDE ALDEFGKIDV LANNAGIGTF GDLVEMDETM
WDEMIDTNLK GVWLCSKHVG KHFVDRGDGG KIVSTSSIYG KVAGPGSGHY IAAKHGVLGL
TKTLALELAE YDVNVNAVCP TGVDTPMISG VLEAYGEDVL DDVISVTGPW NLFEEGMIES
RDISEAYMWL SSDAARYVTG IALPVDAGML AK
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