Gene Htur_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1564 
Symbol 
ID8742155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp1623887 
End bp1624585 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID646512140 
ProductABC transporter related protein 
Protein accessionYP_003403123 
Protein GI284164844 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGAAC TCACGAACCT GCGCGCGTCG TACGGCAAGA CACCGATCCT CCGCGACGTC 
GACATCACCG TCGACGAGGG GGAGATCGTC GGCATCATGG GGAAAAACGG CGTCGGGAAG
ACGACGCTGA TCAAGGCCGT CATGGGCCTG CTCGAGGCCG ACGAGGGAAC CATCGTCTTC
GACGGCGAGG ACGTCACCGA CGAGCCGGCC GACGTCCGCG CCCGCCGCGG GATGGGCTAC
ATTCCGCAGG GTCGGGACGT CTTCCCCGAG TTGACCGTCG AGGAGAACCT GCGGATGGGC
GAGACGATCA ACGAGGGCAA CGACTGCCTG CAGTACGAGG CCGTCTACGA CTACTTCCCG
ATCCTCGAGG AGCGCCGCGA GCAGGAGGCG GGGACGATGA GCGGCGGTCA ACAGCAGATG
CTCGCGATCG GGCGCGCACT GATCGGCAAC CCCGACCTGC TCCTCCTCGA CGAGCCCTCC
GAGGGCGTCC AGCCTTCGAT CGTTCAGGAC ATCACGCGGG ACCTGCGGGG CGTCAACGAG
GAGCTCGGGA CGACGATCTG CTTCGTCGAA CAGAACCTCC ACGTCGTGCA AAACCTCGCG
GAACGCTGCT ACGCCATCGA CAAGGGAGAG ATCGTCGACG AACTCGGACC CGACCGCCTC
GAGTCCCGCG ACGCGGTGAC GGAGTATCTC GCGGTATGA
 
Protein sequence
MLELTNLRAS YGKTPILRDV DITVDEGEIV GIMGKNGVGK TTLIKAVMGL LEADEGTIVF 
DGEDVTDEPA DVRARRGMGY IPQGRDVFPE LTVEENLRMG ETINEGNDCL QYEAVYDYFP
ILEERREQEA GTMSGGQQQM LAIGRALIGN PDLLLLDEPS EGVQPSIVQD ITRDLRGVNE
ELGTTICFVE QNLHVVQNLA ERCYAIDKGE IVDELGPDRL ESRDAVTEYL AV