Gene Htur_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0547 
Symbol 
ID8741129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp581593 
End bp582870 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content66% 
IMG OID646511126 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_003402118 
Protein GI284163839 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTACG ACAAGATCGA GGTCCCCGAC GCGGGGGAGA AGATCACGCT GAAAGAGGGT 
TCCGAGGACG AGATCGAGGT GCCCGACAAC CCGATCATCC CGATCATCCA CGGCGACGGA
ATCGGGAAAG ACGTCGGCCC CGCCGCACAG AAGGTCCTCG AGGCCGCCGC CGAGGCGACC
GGCCGCGATA TCAGCTGGAT GCGCGTCTAC GCCGGCGAGT CCGCCCGGGA GGAGTACGGC
GAGGACGTTA ACCTGCCCGA CGAGACCGTC GACGCGATCC GGGAACACCG CGTCGCGATC
AAGGGCCCGC TGACGACCCC CGTCGGCGCC GGTTTCCGCT CGCTGAACGT CGCGCTGCGA
CAGACGCTGG ATCTGTACGC CAACGTTCGC CCGACCTACT ACCTCGACGG CGTCCCGTCG
CCGATGAAGG CGCCCGAGGA GATGGACATG GTCACCTTCC GGGAGAACAC CGAGGACGTC
TACGCCGGCA TCGAGTGGGA GGCCGGCACC GACGAGGTCG AGCAGGTCCG CGAGTTCGTC
GAGGACGAGA TGGGCTTCGA CGAGACGATG CACGACGGCC CCATCGGTAT CGGCCTCAAG
CCGATCACCG AGAAGGGCTC GAAGCGACTC GTCCGCGAGG CCATCGACTA CGCCTTAGAG
CACGACCGCG ACAAGGTCAC GCTCGTCCAC AAGGGCAACA TCATGAAGTT CACCGAGGGT
CAGTTCGGCG ACTGGGGCAT GGAAGTCGCC GACGAGGAGT ACCCCGACGA TGAAGTCTTC
GCCGCGCCCG ACTCGCTGTG GGAGACCCAG GACGAGGTCG ACATTCCGGA GGACGCCGTC
ATGGTCGAGG AGCGCCTCGC CGACGCAATG CTCCAGTGGA TGCAGCTGCG CACCGACGAG
TTCGACATCC TCGCGATGCC CAACCTCAAC GGCGACTACC TCTCCGACGC CGCCGGCGCC
CAGATCGGCG GCCTCGGGAT CGCTCCGGGT GGCAACTTCG GCAAGGGCCG CATGCTCGCG
GAACCCGTCC ACGGCTCCGC GCCCAAGCGC GCCGGCCAGG ACATGGCCAA CCCGACCGCG
ATGATCCTCT CGGGCCGTCT CATGTTCGAC TACCTCGGCT GGGACGACGC CGCCGACCTG
ATCCGCGACG CCGTCGAGGA GACCATCTCC TCGGGCAAGG TCACCTACGA CTTAGAGCGC
CAGCTCGAGG ACGCCGAGAA GCTCGGCACC AGCGAGTACA CCGACGAGAT CGTCGACACC
ATCGAGAAGC TCTCGTAG
 
Protein sequence
MSYDKIEVPD AGEKITLKEG SEDEIEVPDN PIIPIIHGDG IGKDVGPAAQ KVLEAAAEAT 
GRDISWMRVY AGESAREEYG EDVNLPDETV DAIREHRVAI KGPLTTPVGA GFRSLNVALR
QTLDLYANVR PTYYLDGVPS PMKAPEEMDM VTFRENTEDV YAGIEWEAGT DEVEQVREFV
EDEMGFDETM HDGPIGIGLK PITEKGSKRL VREAIDYALE HDRDKVTLVH KGNIMKFTEG
QFGDWGMEVA DEEYPDDEVF AAPDSLWETQ DEVDIPEDAV MVEERLADAM LQWMQLRTDE
FDILAMPNLN GDYLSDAAGA QIGGLGIAPG GNFGKGRMLA EPVHGSAPKR AGQDMANPTA
MILSGRLMFD YLGWDDAADL IRDAVEETIS SGKVTYDLER QLEDAEKLGT SEYTDEIVDT
IEKLS