Gene Htur_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0417 
Symbol 
ID8740986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp444376 
End bp445398 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID646510985 
ProductHistone deacetylase 
Protein accessionYP_003401990 
Protein GI284163711 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTTG GCTACAGCGA GACTTGTCTC GCACACGATC CCGGTTCGCG CCACCCGGAG 
TCGCCGGACC GGCTCCGCGC GATACGGGAG CGACTGAAGA AGAAACACGG CGTCGAGTAC 
GTCGAGGCAG ACCCCTGCGA TCTCGACCGG CTGGCGGCCG TCCACGAGCG GGAGTACCTC 
GAGTCCGTCC GGGAGTTCTG CGCCGACGGC GGCGGCAACT GGGACCCCGA CACGAGCGCG 
GTCGAGGAGA CCTGGGACGC GGTCTGCCAG AGCGCCGGGC TCGCCTGCTG GGCCGTCGAG 
GCCGCCCTCG AGGGAGCGAC GGGGCGGCGG ACGCCGTTCT CGATCGGCCG GCCGCCGGGC 
CACCACGCCG TCTACGACGA CGCCATGGGG TTTTGCTTCG TCAACAACGT CGCGGTCGCC 
GCCCAGTACG CGCTGGACGC GTACGACGTC GATCGGGTCG CGATCGTCGA CTGGGACGTC 
CACCACGGCA ACGGGACCCA GGACATCTTC TACGATCGCG ACGACGTCTT CTTCGTCTCG 
ATCCACGAAC AGGGGCTCTA TCCGGGCACC GGCGCCGTCG ACGAGACCGG CGAGGGAGCG 
GGCGAGGGAA CCACGATGAA CATCCCGATG CCCGCCGGCA CCGACGACCG CGAGTATCTC 
GCGGCGGTCG AGGGGCCGAT CAGCCACGCG CTGACCGACT ACGATCCCGA TCTGCTCCTG 
ATCAGCGCCG GCTTCGACGC CCATCGCCAC GATCCGATCT CGCGCATTCG GCTCTCGACG 
GAGGCCTACG CCCTGATGAC CGACCGATTC CGGACGCTGG CCGACGAGAC CGACGCCGCC 
TTCGCCTTCA TCCTCGAAGG CGGCTACGGA CTGGACGTTC TCGCGGACAG CGTCGCCATC 
GTCCACGAGA CCTTCGACGG ACGCGAGCCG ATCGAGCCCG ACTCGGAGTT CGGCGAGAAG 
GCCGAGTCGG CGCTCGACGA GGTTCTCGAG GCGCACGGAC TGGATATCGA CCTCGGGGAC 
TGA
 
Protein sequence
MQFGYSETCL AHDPGSRHPE SPDRLRAIRE RLKKKHGVEY VEADPCDLDR LAAVHEREYL 
ESVREFCADG GGNWDPDTSA VEETWDAVCQ SAGLACWAVE AALEGATGRR TPFSIGRPPG 
HHAVYDDAMG FCFVNNVAVA AQYALDAYDV DRVAIVDWDV HHGNGTQDIF YDRDDVFFVS 
IHEQGLYPGT GAVDETGEGA GEGTTMNIPM PAGTDDREYL AAVEGPISHA LTDYDPDLLL 
ISAGFDAHRH DPISRIRLST EAYALMTDRF RTLADETDAA FAFILEGGYG LDVLADSVAI 
VHETFDGREP IEPDSEFGEK AESALDEVLE AHGLDIDLGD