Gene Htur_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0122 
Symbol 
ID8740685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp131717 
End bp132736 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID646510685 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_003401696 
Protein GI284163417 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGT CGAAGGCGTT CGGCCTCGAG CGACTCCGCG GCACGATCGG CGACGTCGAC 
CGCAGTCTCG CGGTCGTCGT CGGCGTCATC TTCTGGGGGT GGCTGCTCAC GCGCTGGCTC 
TACGACTGGG TGATCAGCCG ACTGGGCGTC GGTCCGGGCG CCGGCGAGCA GTTCGTCTCG 
GTCGCCCCCA TCGAGTCGGC GGCGGCGATA TTCGACGACA CGGTGGCGGT GGTCGGTCCG 
ATCGCCGTGC CGATGGACTG GCTCGCGAGC CTGCTGAACG GCATCGCGCT GGGGATCGAG 
ATCGCGCCCG CGCTGGCCGC GGGCGCGTGG TACACCATCG TTCTGACGAT CGCCAGCATC 
GCGCTCGGGC TCGTCATCGC CGTTCCGGTC GCCGTGGTGC GCGTCTACGG CGGGCCGTTC 
CGGTGGTTCG CGCTGGCCTA CACAGAACTG ATCCGCGGGA CGCCACTGCT GGCCCAGTTG 
TTCGTGCTCT ACTACACGCC CTACCTGTCG GTCCGGCTCA GCGACGTCGA CCTCATCGGC 
CGGGGATTCG TTCCCGAGTA CGCCTTCTGG ATCGCCATCG TCGGCTTCAC CATCAACGGC 
TCGGCCTACC AGGCCGAGTA CATCCGCGGC GCCCTCGAGA GCGTCGACGA GGGCCAGTTG 
ACGGCCGCGC GGGCCATCGG CCTCTCGAAA CTCGAGGGAA TCCGCCACGT CGTCCTGCCC 
CAGACGCTGC GCTACGGGAT TCCGGCGTGG ACGAACGAAC TCGTCTACCT GATCAAGTAC 
TCCTCGCTGG CGGGTTTCAT CACGGTGCCG GAGCTGTACT ACCGCGCCAG CGACATCGCG 
TCGTCGACGT TCGAGTACAC GCCGATCTAC GTCCTGCTCG GGCTGGTCTA TATCGGACTC 
GTCCTCTCGG CGACGAACGT CATGAGCCGC GTCGAGCGCC GCGTCGCGGT CCCCGGTCTG 
GGACGGGCCG AGGGGCGCCA ACAGGGCGCG GGCGAGGACG CGGCGACGAA GACCGCATAG
 
Protein sequence
MSASKAFGLE RLRGTIGDVD RSLAVVVGVI FWGWLLTRWL YDWVISRLGV GPGAGEQFVS 
VAPIESAAAI FDDTVAVVGP IAVPMDWLAS LLNGIALGIE IAPALAAGAW YTIVLTIASI 
ALGLVIAVPV AVVRVYGGPF RWFALAYTEL IRGTPLLAQL FVLYYTPYLS VRLSDVDLIG 
RGFVPEYAFW IAIVGFTING SAYQAEYIRG ALESVDEGQL TAARAIGLSK LEGIRHVVLP 
QTLRYGIPAW TNELVYLIKY SSLAGFITVP ELYYRASDIA SSTFEYTPIY VLLGLVYIGL 
VLSATNVMSR VERRVAVPGL GRAEGRQQGA GEDAATKTA