| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_22480 |
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| Symbol | |
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| ID | 7313000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 2450822 |
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| End bp | 2452264 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643612700 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002509988 |
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| Protein GI | 220933080 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00877873 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACAT TTATTCTCTA CCCAGTTTAT GGTATAATTA AAAATAAAAA AAATCAACCG
GCAGGTGATA TAATGCCAGA TTCAATTAAA AATATTAAGG CAAAAAATAA ACTGGGCCTT
ATTTTCTTCC CGGCCTTTGA CTGGGCTATC TCCCCCACCC ATCCGGAGCG GGAAGAACGC
CTCCTCTATA CCAGGGACCA GGTCTTTGAG GAGGGGCTTA TGGATATTGA TGGTATTAAG
GAATTTAACC CCGGAATCGC GGAGGAAAAA GATGTCCAGA AGGTTCATAT CTGTGTCCCT
GAAGTAAAGA AAGTAACCAC TCCATCCCAC CTTATATCAG CCGGGGGAGC CATTAAAGCC
GCCGGGCTTG TTTTAAATAA AGAAGTTGAC AAGGCTTTTG CCATCGTCAG ACCACCAGGC
CACCACGCCT TCCGGGTAGT TCACGGAGCC AGAGGATTTT GTAATATCAA TAATGAGGCC
ATCATGGTTG AAGCCATCCG GTCAAAATAC CCGGATCTGA AAATAGCCTT TGTAGATACT
GATGCCCATC ATGCCGATGG TACCCAGGAA ATATTTTATC ATGACCCCCA TGTCTTACAT
ATATCACTTC ATCAGAATGG GAGAACCCTC TTTCCGGGAT CCGGTTTTAC AAACGAAGTG
GGAGGGCCCG GGGCCTATGC CAGAACCCTC AACATACCCC TCCCCCCCTA CACTACTGAC
GAAGGCCTGC ATTACGTCCT GGATAACCTG GTATTACCGG TTTTAGAAGA TTTTAAGCCT
GACCTCATCA TTAACGCAGC CGGCCAGGAT AATCACTATT CTGACCCCTT AACCAATATG
AAAATATCAG CCCGGGGATA TGCCGAATTA AATGCCAGAC TCAACCCCGA TATTGCCATT
CTTCAGGGTG GTTATTCTAT AGAAAGTGCC CTTCCCTATA TCAATGTTGG GCTCATCCTG
GCCATGGCCG GCCTTGATTA TAGTAATGTC AGGGAACCAG ATTTTGACAG CCGGAACCTG
ACTCAGGACC CGGTCATAAC AGATAATATC AAAAATACGG TTGCTGTCCT GAGGGAAATC
TGGGAAAACC GGAATAACCA GGCACCAGTC CCTGATACAG GTGAATTTAC TATTAAGAAC
AATTTCTATG AAAGGGAAAA ACACATCTTT TATGATACTG ACGGTATAAA TGAACTCCAG
CGAGAGCGGG TAAAAGCCTG TCCCGACTGC CCTGGATATA TTATTATCGA CTCCAGGGCT
GAAAAGGGCT TTAGAAATAC CCGTATCAAA GCCATAAGTA TCCCCTTAAA GGCCTGCAAG
AATTGTCACG AAGAGGCACA CCTCAAATTT GAGGAGGCAA AAAAAGAGGC AGGTAATAAG
TATGATTACC TCTACCTGCA GGATGTAAAG GGAGAAGAAT TTGTAACCTA TCCTTCTCCC
TGA
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| Protein sequence | MVTFILYPVY GIIKNKKNQP AGDIMPDSIK NIKAKNKLGL IFFPAFDWAI SPTHPEREER
LLYTRDQVFE EGLMDIDGIK EFNPGIAEEK DVQKVHICVP EVKKVTTPSH LISAGGAIKA
AGLVLNKEVD KAFAIVRPPG HHAFRVVHGA RGFCNINNEA IMVEAIRSKY PDLKIAFVDT
DAHHADGTQE IFYHDPHVLH ISLHQNGRTL FPGSGFTNEV GGPGAYARTL NIPLPPYTTD
EGLHYVLDNL VLPVLEDFKP DLIINAAGQD NHYSDPLTNM KISARGYAEL NARLNPDIAI
LQGGYSIESA LPYINVGLIL AMAGLDYSNV REPDFDSRNL TQDPVITDNI KNTVAVLREI
WENRNNQAPV PDTGEFTIKN NFYEREKHIF YDTDGINELQ RERVKACPDC PGYIIIDSRA
EKGFRNTRIK AISIPLKACK NCHEEAHLKF EEAKKEAGNK YDYLYLQDVK GEEFVTYPSP
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