Gene Hore_22480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22480 
Symbol 
ID7313000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2450822 
End bp2452264 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content45% 
IMG OID643612700 
Producthistone deacetylase superfamily 
Protein accessionYP_002509988 
Protein GI220933080 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00877873 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACAT TTATTCTCTA CCCAGTTTAT GGTATAATTA AAAATAAAAA AAATCAACCG 
GCAGGTGATA TAATGCCAGA TTCAATTAAA AATATTAAGG CAAAAAATAA ACTGGGCCTT
ATTTTCTTCC CGGCCTTTGA CTGGGCTATC TCCCCCACCC ATCCGGAGCG GGAAGAACGC
CTCCTCTATA CCAGGGACCA GGTCTTTGAG GAGGGGCTTA TGGATATTGA TGGTATTAAG
GAATTTAACC CCGGAATCGC GGAGGAAAAA GATGTCCAGA AGGTTCATAT CTGTGTCCCT
GAAGTAAAGA AAGTAACCAC TCCATCCCAC CTTATATCAG CCGGGGGAGC CATTAAAGCC
GCCGGGCTTG TTTTAAATAA AGAAGTTGAC AAGGCTTTTG CCATCGTCAG ACCACCAGGC
CACCACGCCT TCCGGGTAGT TCACGGAGCC AGAGGATTTT GTAATATCAA TAATGAGGCC
ATCATGGTTG AAGCCATCCG GTCAAAATAC CCGGATCTGA AAATAGCCTT TGTAGATACT
GATGCCCATC ATGCCGATGG TACCCAGGAA ATATTTTATC ATGACCCCCA TGTCTTACAT
ATATCACTTC ATCAGAATGG GAGAACCCTC TTTCCGGGAT CCGGTTTTAC AAACGAAGTG
GGAGGGCCCG GGGCCTATGC CAGAACCCTC AACATACCCC TCCCCCCCTA CACTACTGAC
GAAGGCCTGC ATTACGTCCT GGATAACCTG GTATTACCGG TTTTAGAAGA TTTTAAGCCT
GACCTCATCA TTAACGCAGC CGGCCAGGAT AATCACTATT CTGACCCCTT AACCAATATG
AAAATATCAG CCCGGGGATA TGCCGAATTA AATGCCAGAC TCAACCCCGA TATTGCCATT
CTTCAGGGTG GTTATTCTAT AGAAAGTGCC CTTCCCTATA TCAATGTTGG GCTCATCCTG
GCCATGGCCG GCCTTGATTA TAGTAATGTC AGGGAACCAG ATTTTGACAG CCGGAACCTG
ACTCAGGACC CGGTCATAAC AGATAATATC AAAAATACGG TTGCTGTCCT GAGGGAAATC
TGGGAAAACC GGAATAACCA GGCACCAGTC CCTGATACAG GTGAATTTAC TATTAAGAAC
AATTTCTATG AAAGGGAAAA ACACATCTTT TATGATACTG ACGGTATAAA TGAACTCCAG
CGAGAGCGGG TAAAAGCCTG TCCCGACTGC CCTGGATATA TTATTATCGA CTCCAGGGCT
GAAAAGGGCT TTAGAAATAC CCGTATCAAA GCCATAAGTA TCCCCTTAAA GGCCTGCAAG
AATTGTCACG AAGAGGCACA CCTCAAATTT GAGGAGGCAA AAAAAGAGGC AGGTAATAAG
TATGATTACC TCTACCTGCA GGATGTAAAG GGAGAAGAAT TTGTAACCTA TCCTTCTCCC
TGA
 
Protein sequence
MVTFILYPVY GIIKNKKNQP AGDIMPDSIK NIKAKNKLGL IFFPAFDWAI SPTHPEREER 
LLYTRDQVFE EGLMDIDGIK EFNPGIAEEK DVQKVHICVP EVKKVTTPSH LISAGGAIKA
AGLVLNKEVD KAFAIVRPPG HHAFRVVHGA RGFCNINNEA IMVEAIRSKY PDLKIAFVDT
DAHHADGTQE IFYHDPHVLH ISLHQNGRTL FPGSGFTNEV GGPGAYARTL NIPLPPYTTD
EGLHYVLDNL VLPVLEDFKP DLIINAAGQD NHYSDPLTNM KISARGYAEL NARLNPDIAI
LQGGYSIESA LPYINVGLIL AMAGLDYSNV REPDFDSRNL TQDPVITDNI KNTVAVLREI
WENRNNQAPV PDTGEFTIKN NFYEREKHIF YDTDGINELQ RERVKACPDC PGYIIIDSRA
EKGFRNTRIK AISIPLKACK NCHEEAHLKF EEAKKEAGNK YDYLYLQDVK GEEFVTYPSP