Gene Hore_22440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22440 
Symbol 
ID7312996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2445697 
End bp2446329 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID643612696 
ProductGlycosyl hydrolase family 32 domain protein 
Protein accessionYP_002509984 
Protein GI220933076 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1621] Beta-fructosidases (levanase/invertase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTATT TAAGAAGCTT TAAAGACTCG GTGGGAGATG TAGATTTGAT AGTACACAAT 
GATAGACTCC ACCTTTTCCA TCTGGTATCA CCGGGGAACA GTGCGGTAAG GCACCTTGTT 
TCTGATGATG GGATAATCTG GGATAGCCTC CCTACGGCCA TTACTATCGG TGATACAGGG 
AGCTATGATG ATGATCGTAT CTGGACCATG GGTGTTACCA GACATAAGGG GAAGTTTTAT 
ATGTTCTATA CTGCCTGTTC CACCAGGGAG GCTGGTCGGG TTCAGAGGAC AGCCATGGCT 
GTGTCTCCTG ACCTGATAAA CTGGGAAAAA TACGATGGGA ATCCTGTTTT ATCCGCCGAC 
AGCCGTTGGT ATGAAAATGA ACTGGGAGAC AAAATAATGG TCTCCTGGCG GGACCCCAAG 
ATATATTACG AAAACGGTAA GTACTATATG GTTATTTCCA GCCGGAGTAA TTCAGGTCCT 
TTCCTCAGGA GAGGTGTGGT AGCCCTGGCT GTTTCTGATA ATTTAATTGA CTGGGAGGTA 
AAAAAACCAC TATTTGCCCC GGGGCAGTTT TATGACCTGG AATGTCCCCA GTTATTTAAA 
ATAGTGATTA TTATTACATA TTTGCCTCAA TAA
 
Protein sequence
MYYLRSFKDS VGDVDLIVHN DRLHLFHLVS PGNSAVRHLV SDDGIIWDSL PTAITIGDTG 
SYDDDRIWTM GVTRHKGKFY MFYTACSTRE AGRVQRTAMA VSPDLINWEK YDGNPVLSAD 
SRWYENELGD KIMVSWRDPK IYYENGKYYM VISSRSNSGP FLRRGVVALA VSDNLIDWEV 
KKPLFAPGQF YDLECPQLFK IVIIITYLPQ