Gene Hore_21890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21890 
Symbol 
ID7313737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2380519 
End bp2381742 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content40% 
IMG OID643612642 
Producthypothetical protein 
Protein accessionYP_002509930 
Protein GI220933022 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT TTGCCATCTG GTTCCTTGTT TTAGTTGTAC TGGCAGCTGC AGTAAGTGCT 
GTTCATAAAA TATATGATTT AAGGTATCTT TATCGGATAT ATATTAAGAG AGAATTTGCG
ATAAACCCTA AAGCAGAAAT CAGGCCTGAT AGAGTGTATA AGGTCAGGAT CTGGTATTAT
CCCTATAAAC GGGTAATCAC AAAGGAAGGT AAGGATGAAA AAGAGTTTTT TAAAGAGGTA
GCTAAAGAGG TGGAGAGGAA ATACCCCAAT ATACAACTAA AAATTGGCAG ACTTGATTTC
AGGAAGGGGC GGGCTACCCT CGATAGGGCA CTCAAAGCAG GTGATCCCCC CGATATTTAT
TTTAATTTTA GTAACCAGCC ATATATAACA AAAAAGTTAC AGGTGCCGGC CCATTTATAT
CTGACCCGGG AGGATTATGA ACTTCTACCC CCTTTTATGG AGGAAGGCAG GCTATGGGGT
TTTCCCTTCC TGATTGAGAG ACAGGTCTGG CTGGCCAGAA ACAACTTACC CGGTCTGGCA
GAACCGGTCC TGACAATTAA TAGGTTTGAT GATTTGAAAG ATGATAGCTT AATATTAAAC
TATTATGATC CCACCCTTTT ATTACAATTA TTATCACTCT ATGGTATTAG TGATATTGAA
TATAACGGAA AGACCCTCGA CAATAAAACC CTGGAGGCCC TGAGAGCTGT TTTTAAACTG
GCCCATAATT TAAGGCAGGC AAAGATATAC GGGAAAGCAG GTCAGGTTGA TATCACAATG
TTGAAGAGTT TTTTTCAAGG TAAAACTGTC CTGCTGGGCC CGGTTAATCC CTGGCTAAAA
GAAGTATTGT CCAATAGATT AAGTGATTCC ATTGTGGAAG TTAAGCTTGA TAACCTGGTC
AGGGTTTATA CTCTGACCAT ATTTAGACAG GAACCTTATC GGGGGGATGA TCATACTAAA
GCAGCAGTAG AGGTGGCGAG AATCATTGCT CAGAAAAAGG CTTACATAAT GGCCAGTGAT
TTAGGCCTTA TCCCGGCCTT CAGAATGAAA AAGGAAGTAG AGCAATCAGG GGATATTTCT
ATAGACAGGT ATAAACCTGT CATAACTTTA ACCCCTGAGG AAAGGGATTA CTGGTATAAA
AACATTATTC CACTCTGGGT ACAGTTCTGG GAAGACAACT TAAGCCCTGA AGAAGCCCTG
GCTACTATAA TAAAAAATAA TTAA
 
Protein sequence
MKRFAIWFLV LVVLAAAVSA VHKIYDLRYL YRIYIKREFA INPKAEIRPD RVYKVRIWYY 
PYKRVITKEG KDEKEFFKEV AKEVERKYPN IQLKIGRLDF RKGRATLDRA LKAGDPPDIY
FNFSNQPYIT KKLQVPAHLY LTREDYELLP PFMEEGRLWG FPFLIERQVW LARNNLPGLA
EPVLTINRFD DLKDDSLILN YYDPTLLLQL LSLYGISDIE YNGKTLDNKT LEALRAVFKL
AHNLRQAKIY GKAGQVDITM LKSFFQGKTV LLGPVNPWLK EVLSNRLSDS IVEVKLDNLV
RVYTLTIFRQ EPYRGDDHTK AAVEVARIIA QKKAYIMASD LGLIPAFRMK KEVEQSGDIS
IDRYKPVITL TPEERDYWYK NIIPLWVQFW EDNLSPEEAL ATIIKNN