Gene Hore_20320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20320 
Symbol 
ID7314356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2192717 
End bp2193577 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content40% 
IMG OID643612476 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_002509772 
Protein GI220932864 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0028573 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA TAGGGAAGCT ATATATATGT GGGACTCCGC TGGGCAACCT CGAGGATATC 
TCCTTCAGGG CTATAAAAAC CCTGAAGGAG GTTGATTTAG TTGCGGCTGA AGATACCCGC
CGCACGGTTA AATTATTAAA TTATTATGAT ATTTCTACCC CGTTAACAAG TTACCACGAA
CACAATGAAG AGAAAAAATC AGAGGAATTA ATAAATAAAC TGGAAGAAGG TCAGAAGATA
GCCCTGGTCA GTGATGCTGG AATGCCCGGC ATTTCTGATC CTGGTTTAAT ATTGATCCAG
AAGGTGATAG ACAGGGGGTT TAAGGTTATT CCGGTACCCG GTCCCACAGC TGCTGTTAGT
GCCCTTGTTG TTTCAGGGTT TGATACTGAC CGGTTTGTTT TTGAAGGGTT TTTACCCCGG
AGAGGGAAAA CCAGGGAGGA AAGGTTAAAA GATATAAAGA ATGAAAAGAG GACCATTATT
ATTTATGAAT CCCCGCATCG CTTAAAAAAG ACTTTAAGGG ATTTACATAC ATATATTCCT
GAGAGGAGAA TTGCTTTAAT CAGGGAGTTA ACAAAGGTTT ATGAGGAAAA GATGTACGGG
ACTCCATCTG AACTTTTAGA GGAAGCCACT AAACGTAAGA TAAAAGGAGA GCTTGTAATA
GTAATCGAGG GGGGAGTAAA GGAGAATCAA ACTGGCAGGG ATTTTGGATC ATTAAGTGTA
GTAGATCATA TTAAAATGTT AATGGATAAG GGTTATACCA AGAAAAAGGC TATTAAAGAA
GTCTCCAGAG TCAGAGGCCT CCCCAAAAAG GAGGTTTATA AAAAAGCAGT AGTTATTAAA
GCCAGGCCCG AAAAACGTTG A
 
Protein sequence
MNKIGKLYIC GTPLGNLEDI SFRAIKTLKE VDLVAAEDTR RTVKLLNYYD ISTPLTSYHE 
HNEEKKSEEL INKLEEGQKI ALVSDAGMPG ISDPGLILIQ KVIDRGFKVI PVPGPTAAVS
ALVVSGFDTD RFVFEGFLPR RGKTREERLK DIKNEKRTII IYESPHRLKK TLRDLHTYIP
ERRIALIREL TKVYEEKMYG TPSELLEEAT KRKIKGELVI VIEGGVKENQ TGRDFGSLSV
VDHIKMLMDK GYTKKKAIKE VSRVRGLPKK EVYKKAVVIK ARPEKR