| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_19350 |
|---|
| Symbol | |
|---|
| ID | 7312750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2072310 |
|---|
| End bp | 2073935 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643612381 |
|---|
| Product | alpha-glucan phosphorylase |
|---|
| Protein accession | YP_002509677 |
|---|
| Protein GI | 220932769 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAATGC CGCGGATAGC TTTTTTCTGT ATGGAATACG GTCTCGAGAG TGACTTCAAA
ATATATGCAG GTGGTCTGGG GATTCTGGCC GGGGATTATT TGAAGGCAGC CCGGGATATG
GGACTGCCTA TTGTAGGTAT TGGACTGTTA TGGAAACAGG GTTATACCAG GCAGGTTCTC
AATGAAAAGG ACTATCCAGT CGATACTTAT CCTAATTATA AATATGATTT TCTTGAGGAT
ACCGGAATTA AAATCAGAGT GAAGATACGT AACCGGGATG TTTACTGTCG TGTCTGGAAG
GTTGATAATT TTGACAATGC TCCCCTTTAT TTGCTTGATA CCGATTTAGA TGAAAACGAA
GATAGATGGA TTACCGGTCA ACTTTATGGG TATTTCGAGG AAGAAAGGGT AGCCCAGGAG
ATGGTCCTGG GAATAGGAGG AATAAAAGCC CTGAAGGCCC TTGGCATTGA AGTCGATGTT
TATCACCTGA ATGAGGGTCA TGCTGTTTTT GCAGCACTGG AATTAATAAA AGAACAGATG
CAGAAGGGAC TATCCTTTGC TGAAGCCCGG GAGCTCGTAA AAGAAAAGGT TGTTTTCACC
ACCCATACAC CGGTAAAACA GGGAAATGAA GAGCATACAT ACCGCCGCCT TGATTATATG
GGGGCTTTTG ACTTTTTCAC CCCCGAACAG ATGGGGGAGA TCGGGGGAAT TCCCTTCAAT
ATGACGGTAG CCGGCCTCAG GCTGGCGGGC AAAGCCAATG CTGTAAGTTC TTTGCATAAT
ATTACAGCAA ATAATATGTG GGCCCATATT GACAACCGGG CTGAAATTAT CGGTATTACA
AATGGAGTCC ACCGCCCTAC CTGGGTTTCT GATAAAATAG TGCAAAATAC CTCCAACCCC
GGGGGGTTGT GGGAAGTCCA TAAAGGGTTA AAACAGGAAT TAATAGATTT TATCCACAAA
AGAACAGGTC AGAAATTGGA TATTAATAAG TTATTAATTG GTTTTGCCCG GAGGGCTGTT
CCCTATAAAC GGGGAAATTT AATATTTAAG AATAATGATA GAATAGAACC ATTATTAAAA
GAGGGGAAAA TCCAGATTAT TTTTTCCGGA AAAGCCCACC CCCTTGATGA TGAGGGGAAA
GAAATAATAG CCAGCCAGGT GGGGCTGGCC CGAAAATACC CTGGGCAGGT TGTCTTCCTG
GAGGATTACG ATATGGAGAT AGCCCGTTAC ATGACCAGGG GATGTGATGT CTGGTTAAAT
AATCCAAGGA AACCCATGGA GGCCTGTGGG ACTTCGGGTA TGAAGGCCGC CATGAATGGG
GTTTTAAATT TAAGTGTCCT TGACGGCTGG TGGGCCGAGG CCTGCCGGGA TGGCAAAAAT
GGCTGGCAGT TTGGGGATGG GATGTCAGCT GATGATTTTA CCGGCGATTT AGAGGCCAGG
GTTATTAAAC AGGACCGAAA TGATTTAACT GCCCTCTATG ATGTCCTTTA TACCCGGGTC
TTACCGACTT ATTATAATAA CCGGGAAGAG TGGCTAAAAA TGATGGAGCG GAGCATTGAT
TCCACTTATG ACCGGTATTC AGCCCGGCGG ATGTTAGGGG ATTATTACAA CCTTTTATAC
CAGTAA
|
|---|
| Protein sequence | MQMPRIAFFC MEYGLESDFK IYAGGLGILA GDYLKAARDM GLPIVGIGLL WKQGYTRQVL
NEKDYPVDTY PNYKYDFLED TGIKIRVKIR NRDVYCRVWK VDNFDNAPLY LLDTDLDENE
DRWITGQLYG YFEEERVAQE MVLGIGGIKA LKALGIEVDV YHLNEGHAVF AALELIKEQM
QKGLSFAEAR ELVKEKVVFT THTPVKQGNE EHTYRRLDYM GAFDFFTPEQ MGEIGGIPFN
MTVAGLRLAG KANAVSSLHN ITANNMWAHI DNRAEIIGIT NGVHRPTWVS DKIVQNTSNP
GGLWEVHKGL KQELIDFIHK RTGQKLDINK LLIGFARRAV PYKRGNLIFK NNDRIEPLLK
EGKIQIIFSG KAHPLDDEGK EIIASQVGLA RKYPGQVVFL EDYDMEIARY MTRGCDVWLN
NPRKPMEACG TSGMKAAMNG VLNLSVLDGW WAEACRDGKN GWQFGDGMSA DDFTGDLEAR
VIKQDRNDLT ALYDVLYTRV LPTYYNNREE WLKMMERSID STYDRYSARR MLGDYYNLLY
Q
|
|---|
| |