Gene Hore_18720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_18720 
Symbol 
ID7312686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1999838 
End bp2000881 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content34% 
IMG OID643612319 
ProductType II secretory pathway component PulK 
Protein accessionYP_002509616 
Protein GI220932708 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTAAAA AACAGTATGA GCAGGGGTAT ACTTTTCTAA TAGTTATCTG GGCTTTAGTT 
ATTCTTTCCA TTATCTTTGT TAATTTATAT GAGGAGGTAC AACTCAATAA CAGGCTCACA
GAATACCGTA TATTACAAAA CGAACAAAAA AATATACTCT TCTCGGCTGT TAATATAGGA
ATCAATAAAC TAAAGAGAGA CAAGACAGAA TATGACACCA GGAATGATAG CTGGTTAAAA
CCGGTTAATA GAAAGATAAA AGGCATAAAT TATAAAGTAA AGATAACTGA TGTTGGAAGC
AGGTTAAATA TAAACTATGA TAGATTGTCT ACTTTAAGGC TATTTTCATG GTGGCCTGAA
AGTATTGAAA AGGATTTAAA GGGCAGGGTG ATACCTGATA TACTTCTGCT GAAAGAAGTA
TTTGATGAAA GTTATCCAGA GGCCAGCGAA CTTTTAACTA CATTGGGCCA GTACAATGTA
AATACTGACC GGCTTAAAGG TTTTTATATT CTTCTTATAA AATCAGGTAT TCGTGATTTC
CAGGCTAAAT TAATTGTTGA TAGCCTCAGG AAGGTTAGAG AAGAGAAATA TATAAATAAA
GTTGAGCTTT TACCTGTTTA TATAAAGGGG CTTGATTTAA ATACTTTTGA AAAAATTAAG
CCTTTTCTGA CGACAGAGGG GAGAGTTAAT ATTAATATGG CCCCTGAAGA GGTAGTCGAG
GCAATAATAA GGTCCCTGGA CATAAATCCT GATTTAAAGG AAAATTATAT AAACAAGATT
TTAGAATACC GGGAAGTCAG GGGTTTTAAG AATATAGACA TGCTTGACAA AATAATTGCC
AGGCAGGACC GATTAAAACT GGAAAAATAC TTTGGTGTAA CTTCAAGTTA TTTTCTAATA
AAAGTAGAAG TTACCCGGGG GCCGGTTATA CAGACAGCTG AAGCCCTGGT TCATCGGAGT
GAAGACAGGG ATAATAAAGG TTATAAAATT CGTATCTTAA GATGGTATGA AAATGTTAGT
TACAGGCAGG TTAGATCACA ATAA
 
Protein sequence
MGKKQYEQGY TFLIVIWALV ILSIIFVNLY EEVQLNNRLT EYRILQNEQK NILFSAVNIG 
INKLKRDKTE YDTRNDSWLK PVNRKIKGIN YKVKITDVGS RLNINYDRLS TLRLFSWWPE
SIEKDLKGRV IPDILLLKEV FDESYPEASE LLTTLGQYNV NTDRLKGFYI LLIKSGIRDF
QAKLIVDSLR KVREEKYINK VELLPVYIKG LDLNTFEKIK PFLTTEGRVN INMAPEEVVE
AIIRSLDINP DLKENYINKI LEYREVRGFK NIDMLDKIIA RQDRLKLEKY FGVTSSYFLI
KVEVTRGPVI QTAEALVHRS EDRDNKGYKI RILRWYENVS YRQVRSQ