| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_18640 |
|---|
| Symbol | |
|---|
| ID | 7312678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1993195 |
|---|
| End bp | 1994499 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643612311 |
|---|
| Product | Fimbrial assembly family protein |
|---|
| Protein accession | YP_002509608 |
|---|
| Protein GI | 220932700 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA AAGCAAGGGA AACTTATCTG GAGCTTGGTC AAAACTATTC TAGATTGGTA
CAGATAAAAA GAGAAAAGAT TTCTTGTGAG ATGGTATTTG AGGGAGAAGG TATAAATAAC
CTTAAAAAGG CTGTCGACTC TGTAGTTTCT GAACTTAAGA GGCTTAAATC AATTAATATT
ATACTAACAC AGAGTGAGGT TTTTTTCAGG TCTTACAGGA TTCCCGGGTC CGCCCGGGAT
AGAATTGAGG AAATGATCGA GTTAAGGCTA TCAACGGATC TACCCCTGGA AAAAAAAGAT
TTTATATATT CGATTTTTAC CCATAAAACA GGGAAAAACG AACTACAGGT GCTTACCTTT
ACCAGTAAAA AAGGCTTAAT AGAAGAAATT TATAATAGTT TTAATGGTAG AAATATAAGG
GTTAAAAGTA TTCTACCAGG GGGGTTGATA TATTATTTAA TTCACCGGGA TAAAGAGGAT
TTAACTCCTG GCATTTATCT CGATAAAGAT AGTCACCAGG GTCACATTAC TTTTTTTAAT
GGTAAGAAAA TTTACTTGAA GTCAATTAGA CTTGATGGTA ATTTTAAAAA AGAGCTTAAG
AGAAATATTA ATTTATTTAT AAATTCCTTA GGTAGCGAGA GAGTAAATCT GGTGATTAAT
AATAAAAGGG TAGGAACTCT GAATGGGACC ATTGACATTA CTGACTTAAG TCTTTTTAAT
AATATTGAGG ATGATGACCA TACTCTTTCA AAGTGGGAAA AGGTCTTCCT GTATAAAAAA
GATTTGATCA AAGCAAATTT ATTAACAGAA GTTACCTCAG ATAAAAGAAG GCAGAGAAAC
ATATCAGGGG TATGGTTTTT GATAATAATT ATTATATTAC TTAATGCATA CGGGTTTTAT
GTAAGATATA ATAATGACGT TAAATATCTG GCCACTTTAA AAGGGGCAGC TGAAGATTTA
AAACCCCTTT TAAATGAAAT AAATACCGTT AAAACAGAAT ATAACCACGT TGTCGGGGAA
ATAAAAAAGC TTGAAGCTGA ATTACAGGGC AATTACCGGG GTTATTTACC ATGGCTAAGA
GAACTGGGGG GGATTTTACC TGAGGGGACT GTGATTGAAG AAGTTAGCTT TAAAGACAAT
AAACTGGTAG CTCTGTCAGG TAGTTCTCCT TCAGCAACAG CTGTTATGGA AAACCTGGAG
AAATCAGAAT ACTTCACCAG GTTGAGGTTT GAAGGTAGTA TTACCCGGGA GAATGGTAAA
GAGAGATTCA GGATTGCAGG TGAGATAAGT AATGGCCTTA ACTAG
|
|---|
| Protein sequence | MLKKARETYL ELGQNYSRLV QIKREKISCE MVFEGEGINN LKKAVDSVVS ELKRLKSINI
ILTQSEVFFR SYRIPGSARD RIEEMIELRL STDLPLEKKD FIYSIFTHKT GKNELQVLTF
TSKKGLIEEI YNSFNGRNIR VKSILPGGLI YYLIHRDKED LTPGIYLDKD SHQGHITFFN
GKKIYLKSIR LDGNFKKELK RNINLFINSL GSERVNLVIN NKRVGTLNGT IDITDLSLFN
NIEDDDHTLS KWEKVFLYKK DLIKANLLTE VTSDKRRQRN ISGVWFLIII IILLNAYGFY
VRYNNDVKYL ATLKGAAEDL KPLLNEINTV KTEYNHVVGE IKKLEAELQG NYRGYLPWLR
ELGGILPEGT VIEEVSFKDN KLVALSGSSP SATAVMENLE KSEYFTRLRF EGSITRENGK
ERFRIAGEIS NGLN
|
|---|
| |