| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_18440 |
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| Symbol | |
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| ID | 7313842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1969187 |
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| End bp | 1970320 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643612291 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_002509588 |
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| Protein GI | 220932680 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00065366 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAGAC TGGAAGGTAT AAGTAAAGTT TATCCCAATA TGGACAGACC TGCTGTTAAG
GAATTGAATT TACATATTGA GGAAGGGGAA ATATGTATTC TGGTTGGTCC CTCAGGATGT
GGTAAAACTA CTACTCTAAA AATTATTAAT CGTCTTATTG AACCTTCTTC AGGAAAAATA
TATATAAACG GGAAAGACGC CATGAAAGAA GACCCCAATG AATTAAGGCA AAATATTGGT
TATGTCATCC AGCAGATTGG CCTCTTTCCT CACATGACAG TTTATGAAAA TATTGCTACT
GTACCAAGAC TCCGGGACTG GGATGAAGGC CGGATCCGGA AAAGAGTTGA TGAGCTTTTA
GAGATGGTGG AACTCGATCC GGAAGAAAAC CGTTATAAAT ATCCCATGGA GTTATCCGGT
GGACAACGGC AGAGGGTCGG GGTAGCCCGG GCTATGGCGA TAGACCCACC TATTATGTTA
ATGGACGAGC CCTTTGGAGC AGTTGATCCC ATAACCCGGA CCCAGCTTCA GAACGAGTTT
TTAAAACTGC AGCGCAAGAT AAAAAAGACC ATAGTTTTTG TTACTCATGA TATAGATGAG
GCCATTAAAA TGGGAGATAA AATAGCTATT ATGAATCAGG GTGAACTTGT TCAGTTTGAC
ACCCCGGCCA ACATTTTATT CAACCCCGGG AATGAATTTG TCGAAGACTT TGTTGGTTCT
GACAGGGGCC TTAAGGTCCT TAATTTAATA CATGTTGACA AAATAATGAA TACCGGTGTT
CCTACCGTAG AGAGTGTTTC CCGGGCTGAG GATGTTTTAA AGGAGATTAA TAACCTGGAT
CAGGATTATA TCATGGTCAC CGGTGAAGAT GAACACCTGG CCGGTTATAT AAGCAGCAAT
AGATTGAAAA AACATCAGGA TTCCGACTGG TATAAATTTT TGAAACCGAC CCCGGTTGTC
GAAATAGAGG CAACTTTAAA GGATGCCCTG GCTAAAATGA TCGAAAATGA TGTGGCTGTA
GTCCCGGTTG TAAATGATGA GCGGGAACTG GTCGGAACTG TTACTTTAAA AGATATTAGG
TCTTATGTCA GCAATTCCTA TCAGGAAAAT GATTTAGTGT CAGTTAATAT ATAA
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| Protein sequence | MIRLEGISKV YPNMDRPAVK ELNLHIEEGE ICILVGPSGC GKTTTLKIIN RLIEPSSGKI
YINGKDAMKE DPNELRQNIG YVIQQIGLFP HMTVYENIAT VPRLRDWDEG RIRKRVDELL
EMVELDPEEN RYKYPMELSG GQRQRVGVAR AMAIDPPIML MDEPFGAVDP ITRTQLQNEF
LKLQRKIKKT IVFVTHDIDE AIKMGDKIAI MNQGELVQFD TPANILFNPG NEFVEDFVGS
DRGLKVLNLI HVDKIMNTGV PTVESVSRAE DVLKEINNLD QDYIMVTGED EHLAGYISSN
RLKKHQDSDW YKFLKPTPVV EIEATLKDAL AKMIENDVAV VPVVNDEREL VGTVTLKDIR
SYVSNSYQEN DLVSVNI
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