Gene Hore_16910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16910 
Symbol 
ID7313209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1811210 
End bp1811647 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID643612138 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_002509435 
Protein GI220932527 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA GTCTGAATAT CAGTGCTTCT GGCCTTACTG CCCAGAGGTT GAGGATGGAT 
ATAATAGCTG ATAATATTGC CAATGTCAAC ACCACCAGAA CCGAGGATGG TGGTCCCTAT
CGCCGTAAGC TTCCCGTTTT CAGGGAAAGG GAGGCAGATA GTTTTGCCCG GGTTTTTCAA
AGTAAACTCG GAAAGGATAC AGACAGGCGT GGTGTCGAAG TAGTTGGCAT CAGGGAAGAC
GATTCTCCCT TTAAGATGGT GTATAATCCA GGGCATCCCG ATGCCAATGA AGAAGGTTAT
GTAGCTATGC CCAATGTCAA TATTACCACA GAAATGGTTG ATATGATAAG TGCTTCCAGG
GCTTATGAAG CCAATGTTAC TGCTTTAAAT ACTGCCAAAA ATATGGCCCT TAAGGCCCTG
CAGATTGGAC AGGGTTAG
 
Protein sequence
MLDSLNISAS GLTAQRLRMD IIADNIANVN TTRTEDGGPY RRKLPVFRER EADSFARVFQ 
SKLGKDTDRR GVEVVGIRED DSPFKMVYNP GHPDANEEGY VAMPNVNITT EMVDMISASR
AYEANVTALN TAKNMALKAL QIGQG