Gene Hore_16040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16040 
Symbol 
ID7312640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1719495 
End bp1720421 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content42% 
IMG OID643612051 
ProductHPr kinase 
Protein accessionYP_002509348 
Protein GI220932440 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID[TIGR00679] Hpr(Ser) kinase/phosphatase 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCG CAAAAATAGT TGTTGAGGAT ATAATTAAAA GGTTTTCCCT GGAAGTTCTG 
GCTGGTGAAG GGGGAAAAAG TAATCATATT ACTGTCAGTG ATATCAAGCG TCCCGGGATA
GAACTGGCCG GATTCTGGAA GTATTTTTCA CCGGAGAGGG TCCAGATATT GGGCCGAACC
GAGATGACCT TTCTTAATGA ACTTGACAGT GGGGTTATGG AAACAAGGAT AAAAAAACTT
ATAGAATATA ATCCCTGTTG TATAATTGTG ACCAGGAATC TCCCGGCTCC CCGGTTTCTT
ATTGAGGAAG CAGAAAAAGA GTCGGTTCCC CTGTTACGGA CTCCGGTTTC AACTACAAGG
TTTTCGAGTC AGCTTACCAC ATTTCTTGAG GAAATACTGG CCCCGGAGGA AGCTATTTCC
GGGGTCCTGG TGGATATTTA TGGACTGGGG GTTTTAATTA AGGGAAAGAG CGGTATCGGT
AAGAGTGAAA CAGCCATCCA GCTGGTAAAA AGAGGCCACA GGCTGGTAGC TGATGATATT
ATAAAAGTTA AGAAGATTGG TGAAAGTAAA TTGGTAGGTA TGGCTCCTGA AGTTTCCAGG
TATTTTTTAG AAATGAGAGG CATAGGTATT ATTAATGTAA AATCACTATT TGGGGCAGGG
GCGGTTAAGG ATTCTTCTCC TATTAATCTG GTTGTTAACC TTGAAATCTG GGATGATAAC
AAGGAATATG ACCGTCTTGG GCTTGATGAA AACTATGCTG AAATAATGGG AATAGAAATA
CCGGAACTAA CAATTCCTGT GAAGCCAGGG AGAAATCTGG CTATGGTTCT GGAAGTAGCG
GCCATGAACC TCAGGATGAA AAGTATTGGT TACAATGCAG CCCGGGATTT TATTAAAAAA
GTGGACAAAA ACCGCCCATC CAGTTAA
 
Protein sequence
MKTAKIVVED IIKRFSLEVL AGEGGKSNHI TVSDIKRPGI ELAGFWKYFS PERVQILGRT 
EMTFLNELDS GVMETRIKKL IEYNPCCIIV TRNLPAPRFL IEEAEKESVP LLRTPVSTTR
FSSQLTTFLE EILAPEEAIS GVLVDIYGLG VLIKGKSGIG KSETAIQLVK RGHRLVADDI
IKVKKIGESK LVGMAPEVSR YFLEMRGIGI INVKSLFGAG AVKDSSPINL VVNLEIWDDN
KEYDRLGLDE NYAEIMGIEI PELTIPVKPG RNLAMVLEVA AMNLRMKSIG YNAARDFIKK
VDKNRPSS