| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_15810 |
|---|
| Symbol | |
|---|
| ID | 7312617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1693403 |
|---|
| End bp | 1694155 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643612028 |
|---|
| Product | Triose-phosphate isomerase |
|---|
| Protein accession | YP_002509325 |
|---|
| Protein GI | 220932417 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.187277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGACAC CGTTTATTGC CGGTAACTGG AAGATGAACT TGACATTGAA AGAATCGGTG
GCCCTGGTAG AAGAATTAAA AGACCTGGTT TCCGGTGTTA CCGGGGTTGA GATTGCTGTC
TGCCCACCGG CTGTTAACCT GACCCGTGTT CAGGAAGTGT TAAAGGATAC CAGTATTAAG
GTCGGAGCCC AGAATATGCA CTGGGAAGAC AGTGGTGCCT TTACCGGGGA ATTATCTCCG
GTTATGCTCA GGGATATAGA TGTTGATTAT ATTATTATCG GACATTCTGA AAGAAGACAG
TATTTTAATG AAACCGATCA GATTGTTAAT AGAAAGGTTC AGGCTGCCCA TACCCATGGT
CTGAAACCCA TTATCTGTGT TGGTGAAAGC CTTGATGAGA GGGAAGAAGG CAAAACAAGA
CAGGTAGTCA AAGCTCAGGT TAAATCTGCC CTGGCAGGCT TAACAAAAGA CCAGGTTGCT
GATTCAGTAA TTGCCTATGA ACCCATCTGG GCTATTGGTA CCGGAAAATC GGCTACTGCT
GAAGAGGCCA ATGATGTGAT CAAATTTATC AGGGAAACAG TAAACCAGGA TTTTGACGGA
GCCGGGGATG CCATGAGGAT ACAATATGGT GGTAGTGTTA AGCCCCATAA TATTGAAGAC
TTTATAAAAC AGAGTGATAT TGATGGTGCC CTGGTCGGTG GAGCCAGTCT TAAAGCTGAG
TCTTTTGCTG AAATAGTGAA AAAGTCAGTT TAA
|
|---|
| Protein sequence | MRTPFIAGNW KMNLTLKESV ALVEELKDLV SGVTGVEIAV CPPAVNLTRV QEVLKDTSIK
VGAQNMHWED SGAFTGELSP VMLRDIDVDY IIIGHSERRQ YFNETDQIVN RKVQAAHTHG
LKPIICVGES LDEREEGKTR QVVKAQVKSA LAGLTKDQVA DSVIAYEPIW AIGTGKSATA
EEANDVIKFI RETVNQDFDG AGDAMRIQYG GSVKPHNIED FIKQSDIDGA LVGGASLKAE
SFAEIVKKSV
|
|---|
| |